LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g2281	ATGGTGAAATTGAGCAAGATTGAAGAACAAACTATCTGCTCTCTGCTCATCTTCTTGTTCTTTCAACATCTCACTGTCTCAGTTACCTCCTACACTCCTGTAGAAAATTTTGCCATAAACTGTGGCTTCTCAGGCAACTCAATTACCACTTTAGATAATAGAAAATGGACAACAGATGATGGTTCCAACCTATTTTCTCCTGTTCAAAACGGCCAAACCTCAGTCGTTGCCCGTGAAGTACAGGTTTCTTCAACATTGGAGGAAGCTCCTTATGCCACAGCACGCCTGTCTCGTTCTGAATTCACTTACTCCTTCAAGGTCACTGATGGCCAAAAGTTTGTTCGCCTTTTCTTTTACCCAGCTTCCTACTCCAGCTTTGATCGTTCCAATGCCCTCTTCTCTGTAAAAGCAGGCCAACACACCCTTCTTAAGGACTTCAATGCTTCACTGACTGTTGACAACGATGATAACCCTGCTGTAACAGTGTTCAGAGAGTACTGTATCAACGTGGAACCTGGTCAAAGGCTTAACATAACCTTCACTCCCAGCACATCTCATCCAGAGGCTTATGCATTTATCAATGGGATCGAGGTCGTGTCTATGCCCACCCATCTTTATTACACTAAACCAGAAGACAAAGGGTTGAAGCTAGTTGGAAAAAATAGCCAGCTCCAACTAGGCAATAACACTGCTCTGGAGATGGTGTACAGAATCAACGTTGGAGGGGAAGAAATTCCAGCCGACCAAGACACTAATATGTACCGTCAGTGGGATGATGATGGTGGTGGCTACGCGGAGATGCAGAACCAGCGAAAACTAAAAGCTGGGTTTGATTCAAGACTTATATACCCAGATGCTCTTCTAAAAGATGCTGCACCAAAGGAGGTTTACTTATCTGCACAGACCTCTAAATATATGACTTGGGTGTTTGAAGTGGACTCAAAGTTCGCTTATATGATCAGGCTACACTTCTGTGAGCTTGATCGGGAAGTCCAGCGGGCGGATAGAGTTTTTCAGATACTCATAGCTGACACTTTGGCCGAGCCTCAGGCTGATGTGATTGGTTGGCAACATGATAGCTTTGTTCCTGTCTACAAGGACTATGCTGTTCTGTTGAACCAAGGAAGCTTGAAGAAGCTGAACCTTTCAATCAAGTTGCAGAACCACCCAAAAAGCAAGTATCCTGATGCCATATTGAATGGGATTGAAATTTTTAAAGTCAGTGACAATAGTGACAATCTTGGAGGACCCAATCCAGACACTGACTCTTCACCAGGCAAATCATCAAAAGACTCGAAGAAAAGCACAAAAGCTCCCATTGTGATCGCCTTTGCCTGTGCAGCTTTAGGTGTCATTGTATTGTCTGTCATCGGTTTATTAATTTTCCGGCGAATGACCAGAGCTCCAGTGAACGGCACAGCAAGGAAATCGTCGGATTTGTGCCGGGAATTTTCCCTCGCAGAGATCAAAGCCGCCACCAACAACTTTGATGATCTTTCAATCATTGGAGTTGGAGGCTTTGGTAATGTGTATAGAGGACATATTGACAAGGGACAAACCCCCGTAGCCATCAAACGGCTCAAACCAGATTCACAACAAGGGGTCAACGAGTTTCAGACAGAGATCAAGATGCTGTCTCAGCTTCGCCATGCTCACTTGGTCCCCCTCATTGGTTACTGCAATGATGGCAATGAGATGATCTTGGTGTATGATTTCATGGCCCACGGGACCCTCCGCGACCATCTTTACAACTCTGATAACCAGCCACTTCCATGGAAGCGAAGGCTTGAGATCTGTATAGGAGCAGCAAGGGGGCTACTCTACCTTCATACTGATATAGTGGTGTTGCTTGAGGCTTTGTGTGGAAGGCCACCATTCTGTCGAAGGGGGGAGAAGGGGGAGGGATGCCTTGTGGAGTGGGTCCGCAATTGCTATAAAGAGGGGAAGATTGAAGAAGCGGCTGATCCAGTTTTGAAGGGGACAATCAAACCTCAATGTTTGAAGAAGTTTGTTGAAGTGGCATTAAGTTGTCTGCATGAGAATGGGAAGTGGCGGCCCTCAATGAGAGAAGTGGTAAGAAACCTAGAGTCTGCATTGCAGAAGCAAGGGAGCATGGAGGTTGAGAACCTGATAGAGGGAAAGGCAAAGAGCAAGGACACTGCAATGTTGACCAAATTTAAAAGTGATGAAGAAAGCGATGTGCAATTTTCGACTTCAGATGGATCCATGACTGAGTCCAAGAGCAGCAGCAAGGTAACCGTTGCAAGTAGTGAGTAA	2277	0.455	MVKLSKIEEQTICSLLIFLFFQHLTVSVTSYTPVENFAINCGFSGNSITTLDNRKWTTDDGSNLFSPVQNGQTSVVAREVQVSSTLEEAPYATARLSRSEFTYSFKVTDGQKFVRLFFYPASYSSFDRSNALFSVKAGQHTLLKDFNASLTVDNDDNPAVTVFREYCINVEPGQRLNITFTPSTSHPEAYAFINGIEVVSMPTHLYYTKPEDKGLKLVGKNSQLQLGNNTALEMVYRINVGGEEIPADQDTNMYRQWDDDGGGYAEMQNQRKLKAGFDSRLIYPDALLKDAAPKEVYLSAQTSKYMTWVFEVDSKFAYMIRLHFCELDREVQRADRVFQILIADTLAEPQADVIGWQHDSFVPVYKDYAVLLNQGSLKKLNLSIKLQNHPKSKYPDAILNGIEIFKVSDNSDNLGGPNPDTDSSPGKSSKDSKKSTKAPIVIAFACAALGVIVLSVIGLLIFRRMTRAPVNGTARKSSDLCREFSLAEIKAATNNFDDLSIIGVGGFGNVYRGHIDKGQTPVAIKRLKPDSQQGVNEFQTEIKMLSQLRHAHLVPLIGYCNDGNEMILVYDFMAHGTLRDHLYNSDNQPLPWKRRLEICIGAARGLLYLHTDIVVLLEALCGRPPFCRRGEKGEGCLVEWVRNCYKEGKIEEAADPVLKGTIKPQCLKKFVEVALSCLHENGKWRPSMREVVRNLESALQKQGSMEVENLIEGKAKSKDTAMLTKFKSDEESDVQFSTSDGSMTESKSSSKVTVASSE	758

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g2281	758	FunFam	FERONIA receptor-like kinase	36	202	-	-
	Bisa01g2281	758	SUPERFAMILY	Protein kinase-like (PK-like)	486	700	IPR011009	-
	Bisa01g2281	758	PANTHER	OS03G0124300 PROTEIN-RELATED	14	468	IPR046957	GO:0004672
	Bisa01g2281	758	MobiDBLite	consensus disorder prediction	412	433	-	-
	Bisa01g2281	758	Pfam	Malectin-like domain	39	407	IPR024788	-
	Bisa01g2281	758	Pfam	Protein tyrosine and serine/threonine kinase	501	612	IPR001245	GO:0004672\|GO:0006468
	Bisa01g2281	758	Gene3D	-	230	409	-	-
	Bisa01g2281	758	Gene3D	-	36	202	-	-
	Bisa01g2281	758	FunFam	FERONIA receptor-like kinase	230	408	-	-
	Bisa01g2281	758	Gene3D	Transferase(Phosphotransferase) domain 1	476	617	-	-
	Bisa01g2281	758	ProSiteProfiles	Protein kinase domain profile.	496	758	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa01g2281	758	MobiDBLite	consensus disorder prediction	735	758	-	-
	Bisa01g2281	758	ProSitePatterns	Protein kinases ATP-binding region signature.	502	525	IPR017441	GO:0005524
	Bisa01g2281	758	FunFam	Receptor-like protein kinase FERONIA	470	572	-	-
	Bisa01g2281	758	MobiDBLite	consensus disorder prediction	726	758	-	-
	Bisa01g2281	758	Gene3D	Transferase(Phosphotransferase) domain 1	618	719	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g2281	Bisa-ChrBisa01	41522293	41524797	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa01g2281	614	749	Receptor kinase-like Gene Family	AT3G51550	43.750	8.65e-23	102

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Bisa01g2281		Malectin_like	4e-43	CL0202