Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2205 ATGGAGAATCACACCAACAACAACGCCAAAGCAGTTTCCGGAGGCGCCAAACCCATCAATGACAACGAAGAGCGTTCGAATTTGAATCAAGAGGAGCATGGAGACGGTGTGGATGAGGATGAAAATGGAAGCGAAGATGAAGGAGGGGAAAGAGCTGGATCTGGCTCCATCCAGTCTCCTCATCGCCACCCTTCAAGAACCCCTTTCACTAGTCTCAGTCAGGTCGATGCTGACCTAGCCCTTGCTCGAACCCTTCAGGAGCAGGAAAGGGCATACATGATGCTTAGAATGAGCAATGATGGAAGTGATTATGGAAGTTGGGAAGCTGGAAGCTATGTGCATGATGATGTGGATGATTTTGAAGATCTACATGATGGTACTGATGTAGATGATGATGACCATGATGATGATGAAGTTGATGACGACGATGACGATGATGATGAAGATGAAGAATATGAAAATGAAGATGCATTTGATGCCCATGCTCCTGCTAGTTCTGGGGAAATGGATAATACCAGCATCGAATTTGACCCGGATGTATACTCAAGTGATGAAGCCTATGCAAGAGCATTGCAAGAGGCGGAAGAGAGAGAAATGGCAGCTAGACTGTTAGCTTTGGCTGGGATAAATGATGGGGAAGCTGAGGACACAGAGGACAATGGTGCCAATTCTCAGGATGCATGGGAGGATGTTGATCCAGATGAACTTTCATATGAGGAGCTACTGGCATTGGGTGAAGTTGTTGGGACTGAGAGCAGAGGTCTTTCTACTGATACTATTGCCTCCTTACCTTCAGTCAACTACAAGATGGGAAGTGATCAACATGGAAGTAATGATTCGTGTGTCATATGCCGGGTGGATTACGAGGATGGTGAATCCTTGACTGCACTTTCATGCAAACATTTGTACCATCCTGAATGCATTAATAACTGGTTGAAAATAAACAAGGTTTGCCCTGTTTGTAGTGCTGAGGTATCAACTTCTGGGAGCAGCTTGTAG 999 0.4555 MENHTNNNAKAVSGGAKPINDNEERSNLNQEEHGDGVDEDENGSEDEGGERAGSGSIQSPHRHPSRTPFTSLSQVDADLALARTLQEQERAYMMLRMSNDGSDYGSWEAGSYVHDDVDDFEDLHDGTDVDDDDHDDDEVDDDDDDDDEDEEYENEDAFDAHAPASSGEMDNTSIEFDPDVYSSDEAYARALQEAEEREMAARLLALAGINDGEAEDTEDNGANSQDAWEDVDPDELSYEELLALGEVVGTESRGLSTDTIASLPSVNYKMGSDQHGSNDSCVICRVDYEDGESLTALSCKHLYHPECINNWLKINKVCPVCSAEVSTSGSSL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2205 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 328 IPR013083 -
Bisa01g2205 332 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 23 330 IPR043312 -
Bisa01g2205 332 ProSiteProfiles Zinc finger RING-type profile. 281 322 IPR001841 -
Bisa01g2205 332 SMART ring_2 281 321 IPR001841 -
Bisa01g2205 332 MobiDBLite consensus disorder prediction 117 177 - -
Bisa01g2205 332 SUPERFAMILY RING/U-box 272 327 - -
Bisa01g2205 332 MobiDBLite consensus disorder prediction 121 156 - -
Bisa01g2205 332 Pfam Ring finger domain 279 321 IPR001841 -
Bisa01g2205 332 MobiDBLite consensus disorder prediction 58 72 - -
Bisa01g2205 332 FunFam E3 ubiquitin ligase BIG BROTHER-related 247 328 - -
Bisa01g2205 332 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2205 Bisa-ChrBisa01 39492690 39499939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2205 225 325 C3H Transcription Factor Family AT3G63530 54.808 2.19e-35 127