Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2202 ATGAAGACCGACGCGCCTCCACCGTCGCAGCCCCGCCTGTCTGAGAAGCAAGACGGTGAGGAAGAAGCAGAAGCTAAGGCAAAAGAGGAAAGTTTCAAGAATCAGTCCACGGCAAAAGACGAAGGTGGAGAAGAAGGTTTCCATTTTGTCGCCGATAATGGCAGCGGAGGCGGTGGTTTTGCGGAAGAAGTGAAGATTGATCCGTTGCTTAAAACGGAAGGCGGAGAAGTTGTGAAGAAGAAGCGTGGCAGAAAGAGCAAGGCGGAGAAGGAGGCATTGAAAAACGAGGCTTTGCTGAAGGAGACGGCTGATGGTGATAATTCCAAACGTGCTGTAAATCATGGTTTGGAAGTGCAAGAAGGTTTCCATTTTGTCGCCGATAGTGGCAGCGGAGGCGGTGGTTTTACGGATGAAGTGAAGATTGATCCATTGCTTAAAACGGAAGACGGAGAAGTTGTGAAGAAGAAGCGTGGCAGAAAGAGCAAGGCGGATAAGGAGGCATTGAAAAACGAGGCTTTGCTGAAGGAGACTGCGGATGCTGATAATTCAAAATGTGCTGTAAATCATGGTGAGGAAGGGGAAGAAGGTTTCCATTTTGTCGCCGATAGTGGCAGCGGAGGCGGTGGTTTTGCAGAAGAAGTGAAGATTGATCCATTGCTTAAAACGGAAGGCGGAGAAGTTGTGAAGAAGAAGCGTGGCAGAAAGAGCAAGGCGGAGAAGGAGGCATTGCTGAAGGAGGCATTGGTGGCTTCTATTACGAAGCGTCCTAGAAGGACAACGCAGAAATTGGTCGACTTAAGTTTTGACTTGAATGGTGAGGATGGCGGGGAATTTTGGGGCTTTGAAGATGAAGATGAATATGAGAAAGGAAGATCAAAAAGAAGGCGGGGTAGGAAAGGTCGTAAAAAGGCGAAAGCTGGTGGAAATAAAATATCTGTGACCAAGGAAGGTGTGGGATTCGAAGATAATGGTGATTTAGCTGGGAAGAAGGAGAGTGATCCTGGAAATTATGTGGTTGATTGCAGTGTCGGTGAATTAGATGATAAAGTGAAGATTAAGATGAGTAAAAAACAAAGAATCTTGCATGAAGAGAGGGGCAAAAATCAAGAGGGAATGGTAGAATGTGGTTTGAAAGTGGTTAGTGGAGACAAGAGAAGTTCAGGGCGTGGGAAGGCAACCAATAATGTTAAGGCAGCGGATGAAGTTTTGGGAGCTCATGGTACAGATGACATGGCTAGAGATTCTTCAGAAATCAGATCCTGTAAAGGTTATAGTTTGAGAGCTTCAAAATCTGGAGTTAATGAACTGGAGAAGCCCAAAGTAAACAAGAGGGATCCTGAATGGATTGAAAAAGAGTCTTTAATGTGCCATCAATGTCAGAGAAATGATAAAGGCAGGGTTGTCAGGTATCCTCATTTGAGAGAGGAAGATATTGCTGAGGCATGTCCTGTGTGCTGTGGAAACTGCAATTGCAAAGCATGTTTGCGATCCGATGAATTAGTTAAGAAAATGAAGAAAGGAGAACAAAACATTATAACTGCCAAAGTTGAGCACTATAAGTACTTGCTACAAGCACTTCTGCCATATTTGAGGCAACTATGTGAAGAACAAATGATGGAGAAAGAGATAGAAGCTAAGAGACAAGGTGTCTCACTTTCAGAGCTTCATATACAAAAGGCAGATTGCACTGATGATGAGCGTGTCTATTGTGACAACTGTAAAACTTCCATTTTTGATTGTTATCGAAGCTGTCAACAATGTTCTTTTGACCTCTGTCTGGTCTGTTGCCGTGAGATTCGTCAGGGGCAGCTTCTTGGAGGTGCTGAGCCAGTTGAGTTTGAATTTATCAGTCGAGGAATGGACTATCTGCATGGTGAAGTCGTGGAAAAAATAACTAAATCAGATGTTGAGACTAAGACTGAGGATCGTAATTGGTCAAGATCTGGTTTGAAGGTGACAAGTGATGGTAGCATCCCTTGTCCAAGGGCTGATGGTGGTTGTGGTCATACTAATCTTGAACTGCGAAGCAGACTTGCTGATTACCCGATTTCAGAAATAGTAATGAAAGCAGAAAATATAGCTAAGGCGTATAAGTTTGAAGATGCAGCTTGTACAAGTAAGCAGTGGTGTTCATGTTTCAACCTAGAGAGTAATAACAACAACTTTGTTAGAGATAATAATAGGAGGAAGGCAGCTTCCCGAGAAGACCCCATTGACAATGACAATTATTTATACTGTCCAAGGGCCGTGGATGTAGGACCTGCAGATCTGAAGCATTTTCAGTGGCACTGGAGTAAAGGACAGCCAGTGATTGTCAGCAATGTGCTTGAGTGTACTTCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGGGCTTTCCGTCAGATAACAAAGACCAAGCATGATCAGCATTTGGCAGTGAAGGTCATTGATTGCTTGGATTGGTGTGAGGGAGACATCAATATACACCAATTTTTTACAGGTTACTCAGAAGGTCGGTATGATTGGAAGTCGTGGCCTCAGATATTGAAACTTAAAGATTGGCCTCCTTCTAATTTGTTTGAGGAACGTTTACCACGTCATTGTGCTGAATTCATTACTTCCTTGCCCTATAAGGAATATACAGATCCTCATAAAGGTATTTTTAACCTTGCATCGATGCTGCCAAGAGAAAGTATAAAGCCAGATATTGGGCCAAAGACATATATTGCTTATGGAGTTGCTCAGGAACTTGGGCGTGGTGACTCAGTGACAAAGCTTCATTGTGATATGTCTGATGCAGTGAATGTATTGACACATACTGTTGAAGTTCCCCTTCAAGGTGACAAACTTGCAAAAATTGAAGAATTAAAACAAAAACACCTTGAGCAAGACAGAAGGGAGCTATATGGCAGTGGTCAGGGAGTAGAAGCTAATGTTGAGAATGGCAAAAATGCAGATGTTGATGATACATTGCTTGTAGATGCTTCTGTTGAGGGAGGTGCTCTTTGGGATATTTTTAGGAGACAGGATGTCCCTAAACTGCAGGAATACCTTAAGAAGCACTTCAGTGAATTCAGGCATGTACACTGCTGTCCATTACAGCAGGTTATACATCCCATCCATGATCAGACCTTTTATTTGACTATGGAGCATAAGAAGAAGCTAAAGGAGGAATATGGAATTGAACCATGGACATTCATTCAGAAACTAGGGGATGCAGTTTTGATTCCAGCCGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATTAAGGTCGCCCTTGATTTTGTCTCACCTGAAAGTCTAGATGAGTGTTTCCGTTTGACGAAGGAATTCCGCACGCTTCCCATAAATCACAGGGCCACAGAGGACAAATTGGAGGTGAAAAAAATGACCATTCATGCAATGAGGCACGTTGTGAAAAATTTGGAGCAACCGAGCACTCAAGGTAGAAAAAAGCCCGAGGGTCACTTGTAA 3462 0.4339 MKTDAPPPSQPRLSEKQDGEEEAEAKAKEESFKNQSTAKDEGGEEGFHFVADNGSGGGGFAEEVKIDPLLKTEGGEVVKKKRGRKSKAEKEALKNEALLKETADGDNSKRAVNHGLEVQEGFHFVADSGSGGGGFTDEVKIDPLLKTEDGEVVKKKRGRKSKADKEALKNEALLKETADADNSKCAVNHGEEGEEGFHFVADSGSGGGGFAEEVKIDPLLKTEGGEVVKKKRGRKSKAEKEALLKEALVASITKRPRRTTQKLVDLSFDLNGEDGGEFWGFEDEDEYEKGRSKRRRGRKGRKKAKAGGNKISVTKEGVGFEDNGDLAGKKESDPGNYVVDCSVGELDDKVKIKMSKKQRILHEERGKNQEGMVECGLKVVSGDKRSSGRGKATNNVKAADEVLGAHGTDDMARDSSEIRSCKGYSLRASKSGVNELEKPKVNKRDPEWIEKESLMCHQCQRNDKGRVVRYPHLREEDIAEACPVCCGNCNCKACLRSDELVKKMKKGEQNIITAKVEHYKYLLQALLPYLRQLCEEQMMEKEIEAKRQGVSLSELHIQKADCTDDERVYCDNCKTSIFDCYRSCQQCSFDLCLVCCREIRQGQLLGGAEPVEFEFISRGMDYLHGEVVEKITKSDVETKTEDRNWSRSGLKVTSDGSIPCPRADGGCGHTNLELRSRLADYPISEIVMKAENIAKAYKFEDAACTSKQWCSCFNLESNNNNFVRDNNRRKAASREDPIDNDNYLYCPRAVDVGPADLKHFQWHWSKGQPVIVSNVLECTSGLSWEPLVMWRAFRQITKTKHDQHLAVKVIDCLDWCEGDINIHQFFTGYSEGRYDWKSWPQILKLKDWPPSNLFEERLPRHCAEFITSLPYKEYTDPHKGIFNLASMLPRESIKPDIGPKTYIAYGVAQELGRGDSVTKLHCDMSDAVNVLTHTVEVPLQGDKLAKIEELKQKHLEQDRRELYGSGQGVEANVENGKNADVDDTLLVDASVEGGALWDIFRRQDVPKLQEYLKKHFSEFRHVHCCPLQQVIHPIHDQTFYLTMEHKKKLKEEYGIEPWTFIQKLGDAVLIPAGCPHQVRNLKSCIKVALDFVSPESLDECFRLTKEFRTLPINHRATEDKLEVKKMTIHAMRHVVKNLEQPSTQGRKKPEGHL 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2202 1153 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 81 1141 IPR045109 GO:0032454|GO:0033169
Bisa01g2202 1153 Pfam JmjC domain, hydroxylase 995 1091 IPR003347 -
Bisa01g2202 1153 MobiDBLite consensus disorder prediction 14 47 - -
Bisa01g2202 1153 ProSiteProfiles JmjC domain profile. 877 1108 IPR003347 -
Bisa01g2202 1153 SUPERFAMILY Clavaminate synthase-like 754 1135 - -
Bisa01g2202 1153 Gene3D Cupin 748 1117 - -
Bisa01g2202 1153 MobiDBLite consensus disorder prediction 1 91 - -
Bisa01g2202 1153 FunFam Transcription factor jumonji domain-containing protein 741 1117 - -
Bisa01g2202 1153 SMART cupin_9 858 1108 IPR003347 -
Bisa01g2202 1153 MobiDBLite consensus disorder prediction 293 308 - -
Bisa01g2202 1153 MobiDBLite consensus disorder prediction 284 333 - -
Bisa01g2202 1153 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2202 Bisa-ChrBisa01 39471193 39485814 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa01g2202 JmjC 3.8e-14 CL0029