Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2195 ATGTTTGTCTCTGCTTGCTTCTTACTCCTTTTCACGCAAACTCTGGGGGACACTTCTTTTGTGCATTCTCGAGCATCGTATTACCCGAATTCTGATGAAAACGGAACAGACGTGGGTGCATGCGGGTTTGGTTCGTTTGGTGCAACAGTGAATGGCGGGGATGTGTCAGCTGCGTCTAATCTTTATCGAGATGGCGTCGGCTGTGGTGCCTGTTACCAGGTAAGGTGCAGCAACAGCGCGTATTGCTCAGACAACGGCGTGACGGTGGTTATAACGGACCAAGGGTCGAGTGATAACACTGATTTCATTCTCAGCAAACGAGCCTTCTCTCGTATGGCTCAGACCGCTGATGCTGCTGCATATCTCTTGGCCTCTGGCGTTGTTGATGTTCAATATAGAAGAGTTTCATGCAGTTACCCATCAAAAAACATAACAATAAAGATAGATGAGAGCAGCAGCAATCCCCATTACTTGGCCTTTGTCATTTGGTATCAGCAAGGAAGCCGAGATATTACTGCTGTCCAGCTTTGTGAGACGCAGAACTTATCCTGCAAGTTGCTGAGCAGGAGCCATGGGGCAGTGTGGACCACAAACTCTCCACCAAGCGGACCTTTGTCTGTGAGAATGTTGTTTAGTGACGATGATGGAGATGACACGTGGCTTGTTCCCCTTAATAACATACCCCAAGACTGGAAGCCTGGACAAACATACGACTCTGGAGTACAAGTCACCTCGTAG 738 0.4837 MFVSACFLLLFTQTLGDTSFVHSRASYYPNSDENGTDVGACGFGSFGATVNGGDVSAASNLYRDGVGCGACYQVRCSNSAYCSDNGVTVVITDQGSSDNTDFILSKRAFSRMAQTADAAAYLLASGVVDVQYRRVSCSYPSKNITIKIDESSSNPHYLAFVIWYQQGSRDITAVQLCETQNLSCKLLSRSHGAVWTTNSPPSGPLSVRMLFSDDDGDDTWLVPLNNIPQDWKPGQTYDSGVQVTS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2195 245 CDD DPBB_EXLB_N 21 137 - -
Bisa01g2195 245 Pfam Lytic transglycolase 58 132 IPR009009 -
Bisa01g2195 245 SUPERFAMILY Barwin-like endoglucanases 11 141 IPR036908 -
Bisa01g2195 245 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Bisa01g2195 245 PRINTS Expansin/Lol pI family signature 184 198 IPR007118 GO:0005576
Bisa01g2195 245 PRINTS Expansin/Lol pI family signature 19 34 IPR007118 GO:0005576
Bisa01g2195 245 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Bisa01g2195 245 PRINTS Expansin/Lol pI family signature 125 141 IPR007118 GO:0005576
Bisa01g2195 245 Gene3D - 140 243 IPR036749 -
Bisa01g2195 245 Pfam Expansin C-terminal domain 144 228 IPR007117 -
Bisa01g2195 245 SUPERFAMILY PHL pollen allergen 142 239 IPR036749 -
Bisa01g2195 245 PANTHER EXPANSIN-B3 10 242 - -
Bisa01g2195 245 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 142 IPR007112 -
Bisa01g2195 245 Gene3D - 11 138 IPR036908 -
Bisa01g2195 245 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 239 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2195 Bisa-ChrBisa01 39368254 39371908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2195 1 244 Expansin Gene Family AT4G17030 42.460 3.99e-62 193