Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2192 ATGGTTTGCACTGCTAGCGATTTAGAGGAGTGGAAAGATTTTCCAAAGGGACTTAGGGTTCTTCTCCTTGATGGAGACATTAGTTCTGCTGCAGGGATAAGAACAAAGCTCGAGGGGATGGACTATTTGGTTTCTACATTCTGTAATGAGAATGAAGCCTTGTCAGCAATATCGAGCAGACCTGAAGGCTTCCATGTTGCCATAGTGGAGGTGAGTACCAGCAATAACCTGGGAAGTTTCAAATTTCTTGAGAATGCTAAGGACTTGCCAACCATCATGACTTCAAACAATTATTGCTTGAGCACCATGATGAAGTGCATAGCGCTTGGTGCAGTTGAGTTCTTAAGCAAACCACTCTCCGAGGAAAAACTCAGGAATATCTGGCAGCATGTGGTTCACAAGGCATTCAATGCTGGCACAAGAATCACGTCTGAATCACTAAAACCTGTCAAAGAATCTGTGGTATCGTTGTTGCAACTTCAAACAGACAGTAGAGAACATGACAGTATAAATTTAGAGAAGGCGTCTAGGTTTCATGATACTGATAATGACCACGAGCAGTCAGCAGGAAGTGACAGATATCCAGCTCCTTCAACTCCACAATTAAAACAGGGGGCAAGGTTACTGGATGATGGGGATTGCCAAGAACAAACTAATTGTTCAACTGAAAAAGAAAGTGTTGAACATGATGGAGAATCTAAATTAGTCGAAACTACATGTGGGGATTTGAACACTGAAGATACTTGTGAACCAATAAAAACTGAAATGCCTTTGAAAATGGAGGAAGAGAACTTTTCAAATGAGTCGAAGAATGAGAACGCTGTTTCACCCCATCTCCATGATGGAAAGGTCCTCAGCAACATTGATGGTATTGGTAGTACTTTATCTCCAAATAAAACAGGAGTTCCTAGTGATTCGTACCAGATCAAAACTAATAGGAAGAAGATGAAGGTGGACTGGACACCTCAGCTGCACAAAAAATTTGTGAAGGCAGTGGAACAGTTAGGTGTTGATCAAGCCATTCCTTCTCGAATACTGGAGCTGATGAAAGTGGAGGGCTTGACCAGGCATAATGTGGCAAGCCATCTTCAGAAATATAGAATGCAAAGGAGGAAAATATTGCCAAAGGAAGATCAGAGATGGTTACAAAGACCAATGGCCTTCCCTCCATATTATAATTGCAACATATCACCAGCTCCTATGTATCCTGTATGGGGACAGCCTGGCAGTCAACCAGCCAGTATCCATATGTGGGGTCCACCTGGTTATTCCCAGCGGCAGCCTGCAGAAACTTGGCACTGGAAGCCTTTTCCTAGGATGTATGCAGATGCATGGGGTTGCCCAGTGTTGCCACCTCCTCAATGTCCTCCTTTTTCCTACACTCAAGTTCCCGGACTGCACGATGCTGATGCAGTTGATTGCAGCTCTGCCAAGTCACGAAGCTCCTGCGAGTATCACCCAGCAGAGGAGGTTGTTGACAAGGTAGTGAAGGAGGCAATAAGCAAGCCATGGCTACCAATGCCCTTAGGCCTCAAACCTCCTTCCACCGACAGTGTGTTGGCTGAGCTCTCCAGGCAAGGCATTTCTACCATCCCGCCTCGCTCCAAGCGTTCTAAACCGGAACCCCAATGA 1632 0.4504 MVCTASDLEEWKDFPKGLRVLLLDGDISSAAGIRTKLEGMDYLVSTFCNENEALSAISSRPEGFHVAIVEVSTSNNLGSFKFLENAKDLPTIMTSNNYCLSTMMKCIALGAVEFLSKPLSEEKLRNIWQHVVHKAFNAGTRITSESLKPVKESVVSLLQLQTDSREHDSINLEKASRFHDTDNDHEQSAGSDRYPAPSTPQLKQGARLLDDGDCQEQTNCSTEKESVEHDGESKLVETTCGDLNTEDTCEPIKTEMPLKMEEENFSNESKNENAVSPHLHDGKVLSNIDGIGSTLSPNKTGVPSDSYQIKTNRKKMKVDWTPQLHKKFVKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMQRRKILPKEDQRWLQRPMAFPPYYNCNISPAPMYPVWGQPGSQPASIHMWGPPGYSQRQPAETWHWKPFPRMYADAWGCPVLPPPQCPPFSYTQVPGLHDADAVDCSSAKSRSSCEYHPAEEVVDKVVKEAISKPWLPMPLGLKPPSTDSVLAELSRQGISTIPPRSKRSKPEPQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2192 543 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 534 IPR044825 GO:0003700|GO:0045893
Bisa01g2192 543 SMART REC_2 18 128 IPR001789 GO:0000160
Bisa01g2192 543 MobiDBLite consensus disorder prediction 168 235 - -
Bisa01g2192 543 FunFam Two-component response regulator-like APRR2 17 143 - -
Bisa01g2192 543 FunFam Two-component response regulator 311 374 - -
Bisa01g2192 543 MobiDBLite consensus disorder prediction 506 543 - -
Bisa01g2192 543 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Bisa01g2192 543 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 312 371 IPR017930 -
Bisa01g2192 543 MobiDBLite consensus disorder prediction 519 533 - -
Bisa01g2192 543 NCBIfam myb-like DNA-binding domain, SHAQKYF class 315 369 IPR006447 GO:0003677
Bisa01g2192 543 MobiDBLite consensus disorder prediction 168 189 - -
Bisa01g2192 543 Gene3D - 18 144 - -
Bisa01g2192 543 Pfam Myb-like DNA-binding domain 318 367 IPR001005 -
Bisa01g2192 543 SUPERFAMILY CheY-like 16 134 IPR011006 -
Bisa01g2192 543 SUPERFAMILY Homeodomain-like 313 372 IPR009057 -
Bisa01g2192 543 Gene3D - 311 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2192 Bisa-ChrBisa01 39258007 39262546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2192 1 535 Response Regulator Gene Family AT4G18020 51.590 7.57e-147 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa01g2192 Myb_DNA-binding 1.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1267 11 31663051 31679205 Bisa01g2192 01 39258007 39262546 CCT