Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2169 ATGGATTCACGGGAACCGCCTCAGCCCCCGCCACCGTCGCAACTACAGTCGATGGCACAACCACAACCCCCATCAGCGGCGCCAAACATGATGATGGGACCCACTTCGTATGCTTCCGCTATGCCCAACCCCAACACATCTTCCATGATCAGCCCCAATTCAACGGCCACGATGATGGCCCCTGCCACCGCACGATTCCCCTTCAACTCAGCCGTCCCACAACCCGCTGCTCCGTCTAAGCCTTTGGAACATCTTAACAACAATACTAGTCCTTACGATGGGTCATCGTCCGCGATGAGGCCATGTGGGTTTAACATTGATTCTACGAAGAAGAAGAGAGGCCGGCCGAGGAAGTATTCTCCGGATGGTAACATTGCTTTGGGTTTGGCTCCCACGCCCATGTCCTCTTCCGCCGGGCATGGCGATTCGAGTGGCACGCCATCTACGGAACCTCAGACAAAGAAACACAGAGGAAGGCCGCCGGGCTCTGGAAAGAAGCAGCTGGATGCTCTTGGAGCTGGCGGTATTGGATTTACTCCGCACGTAATTTTGGTAAAAGCCGGTGAGGATATTGCAGCAAAGGTCATGGCATTTTCACAGCAAGGACCCAGGACAGTTTGCATTCTTTCTGCTAATGGTGCAATTGGCAATGTCTCCCTCCGACAGGCAGCAACATCTGGTGGTACTGTGCAATATGAGGGCCGATTTGAGATTATATCTTTGTCAGGCTCTTTCCTGCCATATGATGATAATGGTGGTCGTAGCAGAACAGGTGGTTTGAGTGTGTCTCTTGCAGGGTCTGATGGAAAAGTTTTAGGTGGCGGAGTTGCTGGAATGCTAATTGCTGCATCACCAGTGCAGGTCATTGTCGGGAGCTTTATTGCGGATGGGAAAAAGTCTAGTTCAAATCCCCTGAAATCTGGAGCTTCTCCAACACCAGCGTCTCAAATGTTAAACTTTGGTGCACCAATGACTCCTACCAGCCCTACCTCTCAAGGGCCTTCATCTGAATCCTCTGATGACAATGATAATAATAGTGCTTTTAATAGGGGGCCTGGACTCTATGGTAATGCTAATCAGCCCATTCATAATATGCAGATGTATCATCCTCAACTATGGGCTGGTCAAACTCAGCAGTGA 1140 0.507 MDSREPPQPPPPSQLQSMAQPQPPSAAPNMMMGPTSYASAMPNPNTSSMISPNSTATMMAPATARFPFNSAVPQPAAPSKPLEHLNNNTSPYDGSSSAMRPCGFNIDSTKKKRGRPRKYSPDGNIALGLAPTPMSSSAGHGDSSGTPSTEPQTKKHRGRPPGSGKKQLDALGAGGIGFTPHVILVKAGEDIAAKVMAFSQQGPRTVCILSANGAIGNVSLRQAATSGGTVQYEGRFEIISLSGSFLPYDDNGGRSRTGGLSVSLAGSDGKVLGGGVAGMLIAASPVQVIVGSFIADGKKSSSNPLKSGASPTPASQMLNFGAPMTPTSPTSQGPSSESSDDNDNNSAFNRGPGLYGNANQPIHNMQMYHPQLWAGQTQQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2169 379 SUPERFAMILY AF0104/ALDC/Ptd012-like 178 295 - -
Bisa01g2169 379 Gene3D - 180 304 - -
Bisa01g2169 379 FunFam AT-hook motif nuclear-localized protein 1-like 180 310 - -
Bisa01g2169 379 MobiDBLite consensus disorder prediction 136 151 - -
Bisa01g2169 379 ProSiteProfiles PPC domain profile profile. 174 314 IPR005175 -
Bisa01g2169 379 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 47 346 IPR039605 GO:0003680
Bisa01g2169 379 Pfam Plants and Prokaryotes Conserved (PCC) domain 180 293 IPR005175 -
Bisa01g2169 379 MobiDBLite consensus disorder prediction 36 56 - -
Bisa01g2169 379 MobiDBLite consensus disorder prediction 1 56 - -
Bisa01g2169 379 SMART AT_hook_2 154 166 IPR017956 GO:0003677
Bisa01g2169 379 SMART AT_hook_2 110 122 IPR017956 GO:0003677
Bisa01g2169 379 MobiDBLite consensus disorder prediction 299 361 - -
Bisa01g2169 379 MobiDBLite consensus disorder prediction 68 171 - -
Bisa01g2169 379 MobiDBLite consensus disorder prediction 81 96 - -
Bisa01g2169 379 CDD DUF296 179 293 IPR005175 -
Bisa01g2169 379 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2169 Bisa-ChrBisa01 38787359 38794129 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2169 80 379 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 49.708 5.70e-84 260
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1299 11 32023770 32029407 Bisa01g2169 01 38787359 38794129 CCT