Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2166 ATGACCCAGATCCAAAACTTGTCACAATCTCAACACAAGCCCCAACCTCTTCCAAACCCTAGCTCCTCCTTTTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTGGATCATGTGGAACCCTAGGGATCCCCAGGAAGATGATGACTCGTGGGAGGTTAGAGCCTTCGCTCAGGACACCACCAGTCTCATGGGCACCACCTGGCCTCCCAGGTCCTACACCTGCACCTTCTGTCGAAGGGAGTTCCGTTCAGCCCAAGCTCTCGGCGGCCACATGAACATCCACCGCCGTGACCGTGCCCGCCTCCACCACCTCCCGCCACCGACCCCGTCCCCTCCTCCACCTCCCTCCAACCTAATCGCAAACAATAGAGGAGGAGGAGGAGGAGGAGGTGGACTGTGTCTTCTATATCATTTACCTAGTGGCACTAGTACTACTAGTGCTGCTGCTACTTTGAATGCATGTGGAGAATCGATATCAAAGTCAGTGTCATCACCTTCCAGGCTTCTCTCTATCATGCCCTACCCACCGAACAACTTTGATTTTCGAGTGGAACGCCATGGGTTCATGAATTCTTCTTCTTACTGTGATTCTTCTAGCAAAGTGGAAAACCCCACCACTTCAGGCTCCTATGCACACACCGGCCACCAAGAGGAGCTTGATCTAGAGCTCCGATTAGGGAACAGGCCTACGCCCACCTGA 705 0.5404 MTQIQNLSQSQHKPQPLPNPSSSFSSSSSSFSSSSFWIMWNPRDPQEDDDSWEVRAFAQDTTSLMGTTWPPRSYTCTFCRREFRSAQALGGHMNIHRRDRARLHHLPPPTPSPPPPPSNLIANNRGGGGGGGGLCLLYHLPSGTSTTSAAATLNACGESISKSVSSPSRLLSIMPYPPNNFDFRVERHGFMNSSSYCDSSSKVENPTTSGSYAHTGHQEELDLELRLGNRPTPT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2166 234 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Bisa01g2166 234 PANTHER OS07G0101800 PROTEIN 46 231 - -
Bisa01g2166 234 Pfam C2H2-type zinc finger 74 98 - -
Bisa01g2166 234 MobiDBLite consensus disorder prediction 197 221 - -
Bisa01g2166 234 MobiDBLite consensus disorder prediction 197 215 - -
Bisa01g2166 234 MobiDBLite consensus disorder prediction 1 32 - -
Bisa01g2166 234 SMART c2h2final6 74 96 IPR013087 -
Bisa01g2166 234 Gene3D Classic Zinc Finger 59 106 - -
Bisa01g2166 234 MobiDBLite consensus disorder prediction 103 126 - -
Bisa01g2166 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Bisa01g2166 234 MobiDBLite consensus disorder prediction 106 120 - -
Bisa01g2166 234 SUPERFAMILY beta-beta-alpha zinc fingers 71 101 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2166 Bisa-ChrBisa01 38683628 38684332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2166 39 231 C2H2 Transcription Factor Family AT4G17810 41.089 4.06e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa01g2166 zf-C2H2_6 5.4e-06 CL0361