Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2153 ATGGCTTCAACTCCTCTGGCCTCTGCCTCTGCCTCGGAAGTATCTCTAATCGGTGATTCCCAAATTCTGCTGCGAGTCAAGAAGACCCAACTCAGAGACAACAATGGGAGTCTAAAAGATTGGGTTCCAAACAGAGAACACGGTCCTTGCAATTGGACTGGCATTACCTGTGACGCAAGCAACTCCTCTGTCGTCTCCATCGACCTTTCTGGTGCTGGCATTTACGGTGGCTTCCCATTTGGTTTTTGTCGCATTCGGACCCTGCGGAGCCTTTCTGTTGATCAGAATTATCTCGGTGGTATTATCTCTCCTGAATCATTCCTTCTGTGCTCCCACCTTCATCACCTGAACCTAACCGATAATTGCTTCGTCGGAGGATTGCCGGAATTCTTGTCGGAGTTCTCCGAACTGAGACAACTTGATCTCTCACGTAACAACTTTACCGGCGACATTCCTGCCAGTTTTGGCCGGTTTCCGCGACTGAGGGTGCTCAATTTGAACTTGAACCTTCTCAACGGAACGATTCCTCCGTTCTTAGGAAATCTCAGTGAGCTAACTGTGTTGGCGCTCTCATATAATCCATTCAGTCCAGGGCTTTTACCCTCCCAACTAGGAAATTTATCGAAGCTTGAAAATCTGTTCCTAGCCGATGTAAAATGCAAAGGGAATGTACCGGACTCGATAGGGAAGCTGGTCTCACTCAAGAACTTAGATTTGACTAGAAATTCTTTGTCGGGTAAAATTCCAGATAGCATATCGTTTTTGAGAAGCGTAAAGCAAATTTTGCTATATCTAAATCAACTATCTGGGGAAATTCCTGAAGGTTTAGGAAACCTTAGCAGTTTGATTATCGCTGCATTGCATCTCTCTTATCTGGGCTTGAACGACAATTTACTGGAAGGAGAAGTCCCGGTAAGTCTAGCTTCAAATCCAAATTTACAGGTTTTGAAACTCTTCAATAACAGCTTTACTGGGAAATTACCCGAAGATCTCGGGAGAAACTCCGATTTAGAGGAACTTGATGTTTCTACCAATGACTTAATTGGCGAATTGCCAAAGTACATCTGTGAAAGACACAAGTTTAACCGTCTTGTCACATTTACGAATCGCCTTTCGGGAACTCTACCTGAGCAGTATGGCGACTGTCATTCACTGAAATATGTCAGAATCCAGGACAATCAGCTTTCCGGCGAGGTGCCTCCAAACTTTTGGAGACATCCTGGCCTTCAATTTCTGGAAATGGATAACAACAGGTTCGAAGGTTCAGTCTCTATCTCCGGCGCTCGGGAACTCACTATGCTTCTCATATCCGGTAACAGGTTTTCTGGACAGTTCTCGGCGGAAATTTGTGAATTCCATGAGCTTATAGAGATTGACATGAGCCGAAACCGGTTTACCGGTGAAGTTCCTTTGTGTATAACTAGATTGAGGAAGATACAGAAGCTGAGTTTGCAGGAGAACATGTTCACCGGCGAGATTCCTCGTAATGTGAATTCCTGGACTGACTTGACCTTGTTGAACTTGTCGTATAATCAATTCTGTGGTACGATTCCACCAGAACTTGGTAATTTGCCAGACTTAAATTACCTTGATCTTTCCGCAAATTCCCTGACAGGGGAAATCCCGCCGGAGTTGGCAAACCTCAAGCTTAGCTTGTTCAAAGTGTCAGGCAACAAATTGTCTGGACAGGTGCCGTCTGGTTTCAACAACAAAGCATATTTGTCAGGTCTAGTCGGTAATCCGGGTCTCTGTAGCCCAGTCATTAAAGCACTTTCTCCTTGTTCCAAATCCAAACCCTTTTCTTCCGTTGCTATTATCATTTCAGCTGTCTGCGTTGTGCTCCTCCTGGGGTTTTCGCTCTGGTTCCTAAAGAGCAAGAAGTCATTCTTCGTAAATAGCAAATCCAAGCGCTTCTTCAAGACAACCACATTCCAGAGGGTCGGGTTCAAGGAAGAAGATATAATCCCGTTGTTAACCAGCGAGAACCTCATCGGCACCGGGAGTTCGGGTCGGGTCTATAGGGTGAAGCTCAAAAAAGGGGAGACGGTTGCTGTCAAGAAGCTCTTCGAAGAAGCTACATCAAAACCCAATACAGAATCGGTGTTCAAGTCCGAGGTTGACACATTGGGTCGAATTCGCCATGTTAATATTGTGAAACTTCTATGCAGTTGCAGTGCTGATGATTTCCGGATTCTGGTGTACGAGTATATGGAGAACGGCAGCTTAGGTGACGTTTTGCACAGTGAAAATTGCAAGGAGTTAATGGATTGGTCCCGACGGTTTACCGTAGCCTTTGGTGCAGCTCAGGGGCCTCATGTTGCAGACTTTGGTTTGGCTAAGACCTTGCAGCGTAAGGTAAACGAAGACGGTAGTGCTATGTCTGGGATCGCTGGTTCCTATGGTTACATTGCTCCAGAGTATGCTTATACACTAAAAGTGACTGAGAAGAGCGATGTGTATAGCTTTGGTGTGGTGCTGATGGAACTGATCACTGGGAAGAGGCCAAATGACCCATCCTTTGGTGAGAACAGGGATATAGTAAAGTGGATCACTGAGACTGCCCTATCGCCTGCTGAAGGAGGAAGTAGCAATAGAGAAGCTCGCTGCGTTGATGTGGCCCAGATTGTAGACCATAGATTGAATACCTCCACAAGTGATTATGAAGAGATTGAGAAGGTTTTGAATGTGTCTCTGCTTTGCACCTCAGTGTTCCCCATTAATAGACCTTCAATGAGAAGGGTGGTCGACTTGCTCAAGGAACATAAGGATAGCTACTGGAGAACTGTAAGAACAGTGCCTACACGGCAGGTGAAAGAGGGAGAGAATCTGATCTGGTTTCATTTGACTACCATCATCACAAGGGGTAAATTATCTTACCAACAAAATCAGACAGCATTTATTCCTCAAGGAAGAAAAGGAACTCGTATGATTGCTTAG 2937 0.4528 MASTPLASASASEVSLIGDSQILLRVKKTQLRDNNGSLKDWVPNREHGPCNWTGITCDASNSSVVSIDLSGAGIYGGFPFGFCRIRTLRSLSVDQNYLGGIISPESFLLCSHLHHLNLTDNCFVGGLPEFLSEFSELRQLDLSRNNFTGDIPASFGRFPRLRVLNLNLNLLNGTIPPFLGNLSELTVLALSYNPFSPGLLPSQLGNLSKLENLFLADVKCKGNVPDSIGKLVSLKNLDLTRNSLSGKIPDSISFLRSVKQILLYLNQLSGEIPEGLGNLSSLIIAALHLSYLGLNDNLLEGEVPVSLASNPNLQVLKLFNNSFTGKLPEDLGRNSDLEELDVSTNDLIGELPKYICERHKFNRLVTFTNRLSGTLPEQYGDCHSLKYVRIQDNQLSGEVPPNFWRHPGLQFLEMDNNRFEGSVSISGARELTMLLISGNRFSGQFSAEICEFHELIEIDMSRNRFTGEVPLCITRLRKIQKLSLQENMFTGEIPRNVNSWTDLTLLNLSYNQFCGTIPPELGNLPDLNYLDLSANSLTGEIPPELANLKLSLFKVSGNKLSGQVPSGFNNKAYLSGLVGNPGLCSPVIKALSPCSKSKPFSSVAIIISAVCVVLLLGFSLWFLKSKKSFFVNSKSKRFFKTTTFQRVGFKEEDIIPLLTSENLIGTGSSGRVYRVKLKKGETVAVKKLFEEATSKPNTESVFKSEVDTLGRIRHVNIVKLLCSCSADDFRILVYEYMENGSLGDVLHSENCKELMDWSRRFTVAFGAAQGPHVADFGLAKTLQRKVNEDGSAMSGIAGSYGYIAPEYAYTLKVTEKSDVYSFGVVLMELITGKRPNDPSFGENRDIVKWITETALSPAEGGSSNREARCVDVAQIVDHRLNTSTSDYEEIEKVLNVSLLCTSVFPINRPSMRRVVDLLKEHKDSYWRTVRTVPTRQVKEGENLIWFHLTTIITRGKLSYQQNQTAFIPQGRKGTRMIA 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2153 978 ProSiteProfiles Protein kinase domain profile. 658 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2153 978 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 201 287 - -
Bisa01g2153 978 FunFam Leucine-rich repeat receptor-like protein kinase TDR 288 596 - -
Bisa01g2153 978 Pfam Leucine rich repeat N-terminal domain 19 58 IPR013210 -
Bisa01g2153 978 Pfam Leucine rich repeat 136 194 IPR001611 GO:0005515
Bisa01g2153 978 Gene3D Transferase(Phosphotransferase) domain 1 651 771 - -
Bisa01g2153 978 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 203 920 - -
Bisa01g2153 978 Gene3D Ribonuclease Inhibitor 286 597 IPR032675 -
Bisa01g2153 978 Gene3D Transferase(Phosphotransferase) domain 1 772 930 - -
Bisa01g2153 978 SUPERFAMILY L domain-like 288 591 - -
Bisa01g2153 978 Gene3D Ribonuclease Inhibitor 199 285 IPR032675 -
Bisa01g2153 978 Gene3D Ribonuclease Inhibitor 17 198 IPR032675 -
Bisa01g2153 978 FunFam Leucine-rich repeat receptor-like protein kinase 17 177 - -
Bisa01g2153 978 Pfam Protein kinase domain 660 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2153 978 SUPERFAMILY Protein kinase-like (PK-like) 658 926 IPR011009 -
Bisa01g2153 978 SUPERFAMILY RNI-like 60 363 - -
Bisa01g2153 978 Pfam Leucine Rich Repeat 233 255 IPR001611 GO:0005515
Bisa01g2153 978 Pfam Protein tyrosine and serine/threonine kinase 773 853 IPR001245 GO:0004672|GO:0006468
Bisa01g2153 978 ProSitePatterns Protein kinases ATP-binding region signature. 664 687 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2153 Bisa-ChrBisa01 38353085 38361833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2153 13 922 Receptor kinase-like Gene Family AT5G65710 53.546 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa01g2153 PK_Tyr_Ser-Thr 2.1e-11 CL0016