Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2139 ATGGGGAGGGCTCCTTGCTGCGACAAAGCCAACGTGAAGAAAGGCCCATGGTCGCCGGAGGAAGACGCCAAACTCAAGTCCTACATCGAACAGCACGGCACCGGAGGCAACTGGATCGCCCTTCCCCACAAAATTGGCCTCAAGAGATGTGGGAAAAGCTGTCGGCTTAGGTGGTTGAACTATCTCCGCCCCAACATCAAGCATGGCGGTTTCTCTGAAGAAGAAGACAACATCATTTGCAGCCTCTATGTTAGTATTGGGAGCAGGTGGTCTATTATAGCGGCACAATTACCAGGGAGGACCGACAATGATATAAAGAACTACTGGAACACCAGGCTGAAGAAGAAGCTGCTAGGCAAGCACCGAAAGCATCAAGCAGCTCAAGCTCGTCGAGCCAATACCCTCAAGCAAGAGCCTAATAATGATTTTGTGGTAATGAATATGAACCAAAGTACTCATTGTTTGTCTACGGATCAGCCTTCTCCAAGAGCTTCCATTCAACAACCCTTCGATCTCAACAATCTCAGGGACTTGTTAACGAAATTAGAAGGATATCCATATGATGACCTCACTAATTCCCTCCCTCAACAACACCACCACCACCACCACCACCACCACCAACTATCTTCAGTTTCAGCCTCCCTCGATGTGATGGACAACAGTAGTGCTATGAGTTCATACATGTTTGAAGGGTTTCAAGTTCAAGACTTTCACCCCAATGGTATGAGCGAGATGGCGCAGCAAGTGGATGGGTTAATGCAGGGCAATTACTATGGAATGATGGAGTCGATGGACATGAGTCACGTGACAAATAGTAGCAGCACGGCAACGACTACATCCACTACTGAAACTACTAGTTGGGGAGATATGACCTTTCTACTTTACTCTCCTAATTTGGTTTCTGAATTCCAAGGAATGCCTCATCAAGAAGATGTTGCTTTCCATGAGTCAAGGTACTATGGTTGCAGTGCCAACTCTTTACACATGGGGGTCCTCTAA 999 0.4715 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPHKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKHQAAQARRANTLKQEPNNDFVVMNMNQSTHCLSTDQPSPRASIQQPFDLNNLRDLLTKLEGYPYDDLTNSLPQQHHHHHHHHHQLSSVSASLDVMDNSSAMSSYMFEGFQVQDFHPNGMSEMAQQVDGLMQGNYYGMMESMDMSHVTNSSSTATTTSTTETTSWGDMTFLLYSPNLVSEFQGMPHQEDVAFHESRYYGCSANSLHMGVL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2139 332 MobiDBLite consensus disorder prediction 190 209 - -
Bisa01g2139 332 CDD SANT 71 113 IPR001005 -
Bisa01g2139 332 PANTHER OS09G0431300 PROTEIN 1 279 - -
Bisa01g2139 332 SMART sant 13 64 IPR001005 -
Bisa01g2139 332 SMART sant 67 115 IPR001005 -
Bisa01g2139 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bisa01g2139 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bisa01g2139 332 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bisa01g2139 332 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bisa01g2139 332 FunFam Transcription factor RAX3 70 144 - -
Bisa01g2139 332 CDD SANT 16 62 IPR001005 -
Bisa01g2139 332 Gene3D - 7 68 - -
Bisa01g2139 332 FunFam Transcription factor RAX3 7 68 - -
Bisa01g2139 332 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa01g2139 332 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bisa01g2139 332 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bisa01g2139 332 Gene3D - 70 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2139 Bisa-ChrBisa01 38164850 38166073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2139 1 123 MYB Transcription Factor Family AT3G49690 92.683 1.64e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g2139 Myb_DNA-binding 2.2e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1323 11 32487603 32488746 Bisa01g2139 01 38164850 38166073 CCT