Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2112 ATGTCGATAGGGATTATCGGAGAAGGGAAGGCACAAGGGGAGAATGGAATGGAACAAGAGCTTCTCAGAGGGAAGACAATGAGAAAGAAGCAAAATGAAAAGGAGTTTGCAAAGAAAAAGAATAGGGAAGAAGGAGCTTACGTCTGCTTACGGGGATGGCCTATTTATAGAGGAGAATCACTGAATGGTGACGTATGGATGGCCATCACTAATCTCGGGGTTTCTCATATAAATGCAATTAATGAGGTACTTACAGATACAGATTTCCCCAACACTATTCCTATACTGGTCATCACCATGTCTGTCGCCTCGGACAATCTAACTCTTGACTTGTACTGTAACGAAGCAGCTAGCGAGGTGGTTTCCGTCGATTCCAACATTACTGACTACGAATTCAACATGGGTTTGAGTGTTCCATGGGATTCCGATGATGAGAACTTTGTATTGACCTTACTAGACTCCGAACTTGATCAGATACAGGAAAAACAACAGTCACTAGCACAGCTTCGCAGAAAACCATGGCTCAGAACTGCTCGAGTGGAAGCCATAAATTGGATACTAAAGGTTCAAGCTTACTACAGTTTCAGACCCAAAACGGCGTGTCTTTCTGTGATATATTTCGATCGTTTTCTCTTGTCACACTCATTAACGGAGAATAAAGGATGGCCGCTGCAGCTGTTAGCAGTAGCTTGTCTGGCTGTGGCAGCAAAAATGGAAGAAACAAGGGTTCCAGTTTTAATAGACTTGCAGATAATGGAGCCCAAGTTCGTGTTTAGGCCTAAAACAGTTCAAAGGATGGAGCTTTTGGTCATGGCCACTCTCAGGTGGCGATTGCGCTCTGTGACTCCTTTTGACTTTGCTCAACTTTTCATTGCTAAGCTACCATCATCCTGCTCTGCTTCTTCCACCAAGTGGGGTTCCAATCACATTGCTTCTCGCGTCTCAGATGTTATTATCAGAACATGTTCAGTGATGGATTTCTTAGAGTATCGTCCGTCTACAATAGCAGCTGCTGCTCTGCGGTATGTTGATGCCCAGAATTTCAGCTTCTTCCACAAAAATATAAGCACAGAGATGGTGCAGAAATGTTGCAACCTCATGAAGCAGAGGATTCTCTGTTCAGAGCATTTTTTAGCGACGAAAATAGAGTCGTTGCCCCCAAGCCCTACTTGTGTGCTTGATCATGCGGCTATGGAAGAAAGCAGCAAGGATCACAAGCCTTGA 1224 0.442 MSIGIIGEGKAQGENGMEQELLRGKTMRKKQNEKEFAKKKNREEGAYVCLRGWPIYRGESLNGDVWMAITNLGVSHINAINEVLTDTDFPNTIPILVITMSVASDNLTLDLYCNEAASEVVSVDSNITDYEFNMGLSVPWDSDDENFVLTLLDSELDQIQEKQQSLAQLRRKPWLRTARVEAINWILKVQAYYSFRPKTACLSVIYFDRFLLSHSLTENKGWPLQLLAVACLAVAAKMEETRVPVLIDLQIMEPKFVFRPKTVQRMELLVMATLRWRLRSVTPFDFAQLFIAKLPSSCSASSTKWGSNHIASRVSDVIIRTCSVMDFLEYRPSTIAAAALRYVDAQNFSFFHKNISTEMVQKCCNLMKQRILCSEHFLATKIESLPPSPTCVLDHAAMEESSKDHKP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2112 407 SMART cyclin_7 184 272 IPR013763 -
Bisa01g2112 407 PANTHER CYCLINS 165 369 IPR039361 -
Bisa01g2112 407 ProSitePatterns Cyclins signature. 179 210 IPR006671 -
Bisa01g2112 407 CDD CYCLIN_AtCycD-like_rpt1 178 276 - -
Bisa01g2112 407 Gene3D - 163 279 - -
Bisa01g2112 407 Gene3D - 280 368 - -
Bisa01g2112 407 Coils Coil 152 172 - -
Bisa01g2112 407 Pfam Cyclin, C-terminal domain 281 372 IPR004367 -
Bisa01g2112 407 SUPERFAMILY Cyclin-like 263 372 IPR036915 -
Bisa01g2112 407 CDD CYCLIN_AtCycD-like_rpt2 281 367 - -
Bisa01g2112 407 Pfam Cyclin, N-terminal domain 160 278 IPR006671 -
Bisa01g2112 407 SUPERFAMILY Cyclin-like 170 278 IPR036915 -
Bisa01g2112 407 FunFam D6-type cyclin 162 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2112 Bisa-ChrBisa01 37337887 37343478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2112 102 346 Core Cell Cycle Gene Families AT5G65420 41.767 6.66e-51 171