Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2089 ATGGCCATAAGGCCCTTCCAGTTCACCTTCTCTCGTGAAAGACTGATCTCTTTCCTAACTTCTTCGTCTTCTTCGTCTTCTCGTTCTTCCTCCTCTTCCTTCTCTTCCTGGCGTTTTAAACTTCGGCCATCCCCTCAATCGTTTCCCCCTATTTTTGTGTTTCGTCACTACGCGGCGCCGGCGGAAACTCCGCTCTCACGCGCTCACCTGTGTTATCCGCCACCGCAACCACACGACGACCGCCTGCGGTCGCAGTCACCACCCGACACCCTGGCGCAGAAGATAGGAAAATCCACGCGCCGACCGGGCGCTGCCTCTAAGGCGAGGGTTTATGCCGATGTCAACGTTGTCCGTCCCAAGGAATACTGGGACTATGAGTCCCTTACGGTCCAGTGGGGGGAGCAAGATGACTATGAGGTGGTAAGGAAAGTGGGAAGGGGGAAATACAGTGAGGTGTTCGAGGGTGTTCACTGCACGGATAATGAAAAATGTGTTATCAAGATTCTGAAACCAGTGAAGAAGAAGAAGATCAAGAGGGAGATCAAAATATTGCAGAATCTTTGTGGAGGGCCCAATATTGTAAAATTGCTTGACATTGTTAGAGATCAGCAATCAAAGACTCCAAGCCTTATCTTTGAATATGTTAATAACACTGATTTTAAAGTGCTCTATCCTACACTGTCAGACTATGATATACGATATTACATCTATGAACTTCTTAAGGCCCTGGATTATTGCCATTCGCAAGGAATCATGCATCGGGATGTAAAGCCACATAATGTAATGATTGATCATGAGCAGCGTAAGCTTCGGCTTATAGACTGGGGGCTTGCAGAGTTCTATCATCCTGGCAAAGAATATAATGTTCGCGTTGCCTCAAGATATTTCAAAGGTCCTGAACTTCTTGTTGATCTTCAAGACTATGATTACTCTTTAGACTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATATTCCGTAAGGAGCCATTCTTTTATGGACATGATAATCATGATCAGTTGGCTAAAATTGCAAAAGTACTTGGGACAGATGAATTGAATGCATATCTGAACAAGTATCGGATTGAGTTGGACCCACATCTTGCAGCACTTGTTGGAAGGCATAGCAGGAAGCCATGGTCAAAGTTCATTAATATAGATAATCAACATTTGGCTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTACTGCGATATGATCACCAAGAACGGCTGACTGCAAAAGAAGCCATGGGCCATCCTTACTTCATTCCAATCAGAAATGCGGAAAGCAGCAGAAGTCGTACGCATTGA 1314 0.4513 MAIRPFQFTFSRERLISFLTSSSSSSSRSSSSSFSSWRFKLRPSPQSFPPIFVFRHYAAPAETPLSRAHLCYPPPQPHDDRLRSQSPPDTLAQKIGKSTRRPGAASKARVYADVNVVRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNHDQLAKIAKVLGTDELNAYLNKYRIELDPHLAALVGRHSRKPWSKFINIDNQHLAVPEAVDFVDKLLRYDHQERLTAKEAMGHPYFIPIRNAESSRSRTH 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2089 437 FunFam Casein kinase II subunit alpha 215 426 - -
Bisa01g2089 437 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Bisa01g2089 437 PANTHER CASEIN KINASE II SUBUNIT ALPHA 95 433 IPR045216 GO:0004674|GO:0006468
Bisa01g2089 437 FunFam Casein kinase II subunit alpha 124 214 - -
Bisa01g2089 437 SUPERFAMILY Protein kinase-like (PK-like) 111 427 IPR011009 -
Bisa01g2089 437 MobiDBLite consensus disorder prediction 73 104 - -
Bisa01g2089 437 Gene3D Transferase(Phosphotransferase) domain 1 215 423 - -
Bisa01g2089 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Bisa01g2089 437 CDD STKc_CK2_alpha 119 423 IPR045216 GO:0004674|GO:0006468
Bisa01g2089 437 Pfam Protein kinase domain 138 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2089 437 ProSiteProfiles Protein kinase domain profile. 138 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2089 437 SMART serkin_6 138 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2089 437 Gene3D Phosphorylase Kinase; domain 1 129 187 - -
Bisa01g2089 437 Gene3D Phosphorylase Kinase; domain 1 191 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2089 Bisa-ChrBisa01 36884476 36898191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2089 136 423 Core Cell Cycle Gene Families AT1G76540 30.794 2.68e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Bisa01g2089 Pkinase 3.2e-65 CL0016