Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2088 ATGGGAGAAGAGTATGGTAGGGTGGGAGTGAGAGTGTACGACCCAAAAAGAGACAGAGAGAGTGTGGAAGAAGTTGAAAGGATATGCGAAGTTGGACCCAGTGGCAAGCTTTCTCTCTTCACCGACCTCCTTGGTGACCCAATTTGCAGGGTCCGCCACTCACCTGCTTTCCTCATGCTGGTGGCTGAGATGGGCCAAGAGATCGTGGGAATGATCAGGGGTTGCATCAAAACTGTCACATGCGGAAAGAAACTCTCCAGAACTGGCAAAATCACTAACAATACCCCTAAACCCCTCCCGGTGCACACCAAACTCGCCTACATCTTAGGCCTTCGCGTCTCTCCTTCTCACCGGAGAATGGGAATAGGATTGAAGCTGGTGAACAGAATGGAGGAGTGGTTCAGAGATAATGGGGCTGAATACTCGTACATAGCGACGGAAAACGACAATTTCGCGTCCGTTAAGCTGTTCACCGACAAATGCGGGTACTCAAAGTTCCGTACTCCGTCCATCCTCGTGAACCCCGTTTTCGCTCACCGTCTCAGCCTCTCCCACAAAGTCGCGATCATCCAACTCGGCCCCTCCGACGCCGAGATCCTCTACCGCCGCCGCTTCGCCACCACCGAGTTCTTCCCTCGCGACATTAACTCCATCCTCAACAACAGACTCTCCCTCGGCACTTTCCTCGCCGTACCACGTGGGTCCTACAGTCCCGACACGTGGCCCGGGTCGAACCGCTTCCTTTCGGAACCGCCCGAGTCCTGGGCGGTTATCAGCGTCTGGAACTGTAAAGACGTGTTCACGCTCGAGGTTCGTGGCGCGTCGTGCGTGAAGCGGACCCTGGCCAAAACGACGCGGATGGTGGACCGGGCGTTGCCGTTTCTGCGGTTGCCGTCGTTTCCGAATGTGTTTAGGCCGTTCGGGTTTCACTTTATGTATGGGCTTGGAGGGGAAGGCCCGGAGGCGGCAAATATGGTGAAGGCGCTGTGTGGTCAAGCGCACAACCTCGCGAAGGAGCGTGGGTGTGAGATGGTGGTGACGGAGGTTTCGAGCCGCGAACCGTTGAGGATAGGGATACCGCACTGGAAGATGCTATCTTGCGCCGAGGACTTATGGTGCATCAAGAGGCTTGGGGAAGACTACAGTGACGGCTCTGTCGGTGACTGGACAAAATCTCCACCTGGACTGTCCATTTTCGTTGACCCCAGAGAATTCTGA 1218 0.5558 MGEEYGRVGVRVYDPKRDRESVEEVERICEVGPSGKLSLFTDLLGDPICRVRHSPAFLMLVAEMGQEIVGMIRGCIKTVTCGKKLSRTGKITNNTPKPLPVHTKLAYILGLRVSPSHRRMGIGLKLVNRMEEWFRDNGAEYSYIATENDNFASVKLFTDKCGYSKFRTPSILVNPVFAHRLSLSHKVAIIQLGPSDAEILYRRRFATTEFFPRDINSILNNRLSLGTFLAVPRGSYSPDTWPGSNRFLSEPPESWAVISVWNCKDVFTLEVRGASCVKRTLAKTTRMVDRALPFLRLPSFPNVFRPFGFHFMYGLGGEGPEAANMVKALCGQAHNLAKERGCEMVVTEVSSREPLRIGIPHWKMLSCAEDLWCIKRLGEDYSDGSVGDWTKSPPGLSIFVDPREF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2088 405 Gene3D - 40 169 - -
Bisa01g2088 405 FunFam Probable N-acetyltransferase HLS1-like 17 170 - -
Bisa01g2088 405 Pfam Acetyltransferase (GNAT) family 52 163 IPR000182 GO:0016747
Bisa01g2088 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 51 165 IPR016181 -
Bisa01g2088 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 184 IPR000182 GO:0016747
Bisa01g2088 405 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 405 - -
Bisa01g2088 405 CDD NAT_SF 59 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2088 Bisa-ChrBisa01 36858467 36860026 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Bisa01g2088 Acetyltransf_1 1.1e-18 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1373 11 33135138 33136712 Bisa01g2088 01 36858467 36860026 CCT
Bisa01g2088 01 36858467 36860026 Bisa01g2088 01 36858467 36860026 ECH