Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2083 ATGGCCCTCCTCTGCTTCTCCTTCCTTTACCAGCTTCCCACCTTACTCAGTCCCATTTTCTGCAAAACGGACCTTCAAACTCCAAGAAGCTCTCAATTCACTGCCAATCTATCCGAGCCAGCACAAGCTGATGCTATGCGTCGTACCAATCAGGACAAGCTCAGGATTGCTGTTTTGGTTTCTAAAGCTGGATTTAAATTCATCCAAGGTGTGGAAACAAGTGATTACCAAGTGCCTGAGGAAGTTAGACAAGCAGGTTTTGAGATCTGTGCAGATGAATTGGAATCTATTGTTGAAAATCGTGATTTAGAGAAGCTAAATTATCACGGAGGGCTAAGTGGCATTTCAAACAAAGTTTCTACCTCACTCACTGATGGCATTACAACTAACTCTCACCAACTCAATAGTAGACAAGAGATTTATGGAATCAACAAATTCACCGAGAGTGAAGTCCGTAGTTTCTGGGTTTTTGTTTTTGAAGCCCTTCAAGACACCACTCTGATGATCCTCGGCGTGTGTGCTATTGTGTCTCTGTTAGTAGGCATATCCACAGAAGGATGGCCCAGTGGAGCTCACGACGGTCTAGGAATCGTCATGAGTATCCTTCTCGTTGTGTTCGTCACAGCAACAAGTGATTATCGCCAATCATTACAGTTCAGAGATTTAGACAAGGAGAAAAAGAAAATCTCCATTCACGTCACGAGAGATGGGTATAGGAAAAGACTATCAATTTACGATTTACTTCCTGGTGATATTGTTCATCTTTCTATTGGAGACCAAGTCCCCGCAGATGGACTCTATGTTTCAGGATTCTCTGTTTCAGTTGACGAGTCAAGCTTAACAGGGGAGAGCGAGCCGGTGATGGTGAATTCTCAACACCCATTTCTTCTATCTGGAACAAAGGTCCAAGACGGGTCCTGCAAGATGATGGTCACAACCGTAGGGATGAGAACTCAATGGGGTAAATTAATGGCGACTTTAAGTGAAGGTGGAGATGATGAAACCCCATTGCAAGTCAAACTAAAAGGAGTGGCCACTGTCATAGGGAAGATGGGCTTGCTGTTTGCGGTTATTACGTTTGCCGTTTTGGTGAGAGGGCATATGACACGTAAACGACAAGAAGGAAAATTCTGGAGCGTGTCAGGGGATGACGCGGTGGCGATGTTGGAGTTCTTTGCCGTTGCGGTTACAATCGTTGTCGTTGCTGTCCCGGAGGGGCTGCCTCTGGCTGTGACATTGAGCCTTGCGTTTGCCATGAAAAAGATGATGAACGACAAAGCGCTCGTAAGACACTTGGCCGCCTGCGAGACTATGGGATCGGCTACGACTATATGTAGCGACAAGACAGGGACATTAACGACAAACCGCATGGCTGTCGTTAAAACATGCATTTGTATGAACACAAAGGAAATTGACAATAAGGTTTCATCTAGTTTGTGCTCTGAACTCCCAGATTCTGCAGTGAAATTATTACTAGAGTCGATATTTAATAACACTGGAGGAGAAGTTGTGGCGGCTAAGAAGAAAAGAAAGCGTGAGATTTTGGGGACGCCTACAGAGACAGCAATATTGCAGTTTGGGTTGTCATCACTGGGTGGGGATTTTACAAAGGAGAGAAAAGCATGTAAGCTGGTGAAAGTTGAGCCATTCAATTCAGAGAAGAAAAGGATGGGTGTGGTGGTGGAGCTTCCTGGAGGGAATTTTCGAGCACATTGTAAAGGAGCTTCTGAAATTGTTCTTGCTGATTGTGACAAGGTGATTGATTCAGAGGGTGAGGTTGTTGCACTTGACAAGGAAAGGATCAATCATCTTAGGGACACGATTGATTCGTTTGCCACTGAGGCTCTTAGAACTCTATGCATTGCTTATAAGGAACTGGGAAATGGGTTTTCTGATGCAGACCCTATCCCTGCTTCAGGGTATACTTGTATAGGAATTGTTGGTATTAAAGATCCTGTTCGTCCTGGTGTTAGGGAATCTGTGGCAACTTGTCGTAGGGCAGGTATTACAGTTAGGATGGTTACAGGGGATAATATTAACACTGCAAAGGCCATAGCCAGAGAATGTGGAATTTTAACTGATGAAGGCATAGCCATTGAAGGTCCAGAATTTAGAGAGAAGACTCAGGAGGAAATGTTTGAACTGATCCCCAAAATTCAGGTCATGGCTCGATCTTCGCCTTTAGATAAACATACGTTGGTGAAACAATTACGTACTACGTTTGGGGAAGTTGTGGCTGTGACTGGTGATGGAACAAATGACGCACCAGCCCTTCGTGAAGCTGACATTGGACTTGCAATGGGCATTGCAGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATAATTCTGGATGATAATTTCTCTACTATCGTCACAGTGGCAAAATGGGGGCGTTCAGTTTATATAAATATTCAGAAATTTGTTCAGTTTCAACTTACAGTTAATGTGGTTGCATTACTGGTAAATTTTACTTCAGCCTGTCAGACAGGAAATGCACCCCTCACAGCAGTTCAGCTGTTGTGGGTGAACATGATAATGGACACACTAGGAGCTCTCGCACTGGCCACCGAACCGCCAAATGATGAATTAATGAAGCGTTCACCAGTGGGAAGGAAGGGCAATTTCATCACCAATGTGATGTGGAGGAACATCCTAGGACAATCGTTGTACCAAGTTTTGGCCATATTGATTCTCCAGTCAAAAGGAAAATGGATGTTCGGTTTTAAAGGCCCAGATTCTGATCTCTTGTTGAACACACTTATCTTCAACACCTTCGTGTTTTGCCAGGTTTTCAATGAGATAAACTCACGGGAGATGGAGGAAATAGACGTGTTCAAAGGGATATTAGATAATAATGTTTTCGTGGGTGTCATAAGTTGCACCGTTGTGTTTCAATTCATAATAGTTGAGTATTTAGGAACCTACGCCAACACCACACCCCTGGCTCCTGTGCATTGGCTTCATTGCATCTCCATCGGATACATTGGAATGCCAATCGCTGCTCGCTTAAAGAAGATTCCTTTCTGA 3030 0.4403 MALLCFSFLYQLPTLLSPIFCKTDLQTPRSSQFTANLSEPAQADAMRRTNQDKLRIAVLVSKAGFKFIQGVETSDYQVPEEVRQAGFEICADELESIVENRDLEKLNYHGGLSGISNKVSTSLTDGITTNSHQLNSRQEIYGINKFTESEVRSFWVFVFEALQDTTLMILGVCAIVSLLVGISTEGWPSGAHDGLGIVMSILLVVFVTATSDYRQSLQFRDLDKEKKKISIHVTRDGYRKRLSIYDLLPGDIVHLSIGDQVPADGLYVSGFSVSVDESSLTGESEPVMVNSQHPFLLSGTKVQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLKGVATVIGKMGLLFAVITFAVLVRGHMTRKRQEGKFWSVSGDDAVAMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMAVVKTCICMNTKEIDNKVSSSLCSELPDSAVKLLLESIFNNTGGEVVAAKKKRKREILGTPTETAILQFGLSSLGGDFTKERKACKLVKVEPFNSEKKRMGVVVELPGGNFRAHCKGASEIVLADCDKVIDSEGEVVALDKERINHLRDTIDSFATEALRTLCIAYKELGNGFSDADPIPASGYTCIGIVGIKDPVRPGVRESVATCRRAGITVRMVTGDNINTAKAIARECGILTDEGIAIEGPEFREKTQEEMFELIPKIQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACQTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRKGNFITNVMWRNILGQSLYQVLAILILQSKGKWMFGFKGPDSDLLLNTLIFNTFVFCQVFNEINSREMEEIDVFKGILDNNVFVGVISCTVVFQFIIVEYLGTYANTTPLAPVHWLHCISIGYIGMPIAARLKKIPF 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2083 1009 SUPERFAMILY HAD-like 443 853 IPR036412 -
Bisa01g2083 1009 NCBIfam calcium-translocating P-type ATPase, PMCA-type 105 1008 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bisa01g2083 1009 FunFam Calcium-transporting ATPase 208 328 - -
Bisa01g2083 1009 FunFam Calcium-transporting ATPase 765 1009 - -
Bisa01g2083 1009 Gene3D - 160 996 - -
Bisa01g2083 1009 FunFam Calcium-transporting ATPase 455 652 - -
Bisa01g2083 1009 PRINTS P-type cation-transporting ATPase superfamily signature 445 459 - -
Bisa01g2083 1009 PRINTS P-type cation-transporting ATPase superfamily signature 645 656 - -
Bisa01g2083 1009 PRINTS P-type cation-transporting ATPase superfamily signature 748 767 - -
Bisa01g2083 1009 PRINTS P-type cation-transporting ATPase superfamily signature 276 290 - -
Bisa01g2083 1009 PRINTS P-type cation-transporting ATPase superfamily signature 772 784 - -
Bisa01g2083 1009 PRINTS P-type cation-transporting ATPase superfamily signature 667 677 - -
Bisa01g2083 1009 Pfam Cation transporting ATPase, C-terminus 833 1006 IPR006068 -
Bisa01g2083 1009 Gene3D - 442 793 IPR023214 -
Bisa01g2083 1009 ProSitePatterns E1-E2 ATPases phosphorylation site. 447 453 IPR018303 -
Bisa01g2083 1009 Gene3D - 131 328 - -
Bisa01g2083 1009 SFLD Haloacid Dehalogenase 427 800 - -
Bisa01g2083 1009 PRINTS H+-transporting ATPase (proton pump) signature 604 622 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa01g2083 1009 PRINTS H+-transporting ATPase (proton pump) signature 748 764 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa01g2083 1009 PRINTS H+-transporting ATPase (proton pump) signature 780 805 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa01g2083 1009 Pfam haloacid dehalogenase-like hydrolase 442 762 - -
Bisa01g2083 1009 SUPERFAMILY Calcium ATPase, transduction domain A 230 325 IPR008250 -
Bisa01g2083 1009 SUPERFAMILY Calcium ATPase, transmembrane domain M 109 1008 IPR023298 -
Bisa01g2083 1009 NCBIfam HAD-IC family P-type ATPase 386 468 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa01g2083 1009 NCBIfam HAD-IC family P-type ATPase 541 693 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa01g2083 1009 NCBIfam HAD-IC family P-type ATPase 718 827 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa01g2083 1009 PANTHER CATION TRANSPORTING ATPASE 75 1008 - -
Bisa01g2083 1009 Pfam Cation transporter/ATPase, N-terminus 108 177 IPR004014 -
Bisa01g2083 1009 CDD P-type_ATPase_Ca_PMCA-like 134 881 - -
Bisa01g2083 1009 Gene3D - 455 652 IPR023299 GO:0000166
Bisa01g2083 1009 SFLD p-type atpase 427 800 IPR044492 -
Bisa01g2083 1009 FunFam Calcium-transporting ATPase 641 793 - -
Bisa01g2083 1009 Pfam E1-E2 ATPase 229 423 - -
Bisa01g2083 1009 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 451 657 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2083 Bisa-ChrBisa01 36754110 36760808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2083 20 1008 Primary Pumps ATPases AT4G37640 77.879 0.0 1561