Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2079 ATGAGTTGCAACGGGTGCCGGGTTCTTCGAAAGGGTTGCAGCGAGGCCTGTATTTTGCGACCTTGCTTGCAGTGGATCGACACCGCCGAAGCCCAAGGCCACGCCACCGTCTTTGTCGCCAAATTCTTCGGCCGTGCGGGCCTCATGTCCTTCATTTCCAACGTCCCTCCTAACCAGAGACCTGCTCTGTTCCAGTCCCTGTTGTTCGAAGCTTGTGGACGAACGGTGAACCCTGTGAACGGAGCCGTCGGGCTTCTCTGGACGGGAAACTGGCACGTGTGCCAGGCCGCCGTGGAGACGGTGCTCCGCGGTGGCACCTTGAGGCCCATGCCGGAGCTTCTCGGCTCGGACGCTCCTACTCCGACCGCCGACGAGGCATCCGAAGCAGAGGTAACGTGCAATGACATGTGGAGGGTCCGAGATCCGAACCCGAATTCGCGATATAATAACAATAAGGTCTCTTCTGGCGGCAAACGCAAACAGTCGGATGACTCCACCAAGCTCCAATCTACCGATCTCGACCTCCGATTGACGCCGAGTTTCCTCCAGAAAGTGGCAGCCTACGGCTGCGGACCGGAAGTCCTGCGGCCGGACACACCGTCGATGAACTCGGAAGAATCCGTCACGACCACGATTTGCTTCGAAAGTGGGACAGGAGATCACTACGGTCAAGGCGGAGGCCGGAAGCTTCTCAACCTTTTCACTTGA 708 0.5847 MSCNGCRVLRKGCSEACILRPCLQWIDTAEAQGHATVFVAKFFGRAGLMSFISNVPPNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELLGSDAPTPTADEASEAEVTCNDMWRVRDPNPNSRYNNNKVSSGGKRKQSDDSTKLQSTDLDLRLTPSFLQKVAAYGCGPEVLRPDTPSMNSEESVTTTICFESGTGDHYGQGGGRKLLNLFT 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2079 235 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bisa01g2079 235 MobiDBLite consensus disorder prediction 112 171 - -
Bisa01g2079 235 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Bisa01g2079 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2079 Bisa-ChrBisa01 36727172 36727982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2079 1 234 AS2 family AT3G49940 57.198 2.04e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa01g2079 LOB 1.2e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2079 01 36727172 36727982 Bisa11g1378 11 33223977 33224788 CCT
Bisa11g1378 11 33223977 33224788 Bisa01g2079 01 36727172 36727982 ECH
Bisa01g2079 01 36727172 36727982 Bisa01g2079 01 36727172 36727982 ECH