Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2077 ATGTCGACGCAATTCACCCCAACACTACCACCTTTCCACCAAAGCACGCCCTTCTCCAACCCTGTCATTTCCAATAAACATCAAATAATTGCTAGGACGACAAGTTCGTGGCCAGGATTCCCCACATCGAAGGCGCTTAGTGGTTTCAGCGATGTTTATAACTGCACGGAGCAGTTGCTCGTTCACTGTGCCAACGCCATCGACACCAATGACGTCTCTCTCGCCCAACAAATCCTCTGGGTCCTCAACACCATCGCTCCCCCCGACGGCGACCCCAACCAGCGCCTCGCCTCCTCCTTCCTCCGGGCCTTCACCTCACGAGCAGCCAAATCCGGCAGCTCCAAAATGCTCGCCGCCGTCGCACCAGCCCACCACCCCAACAATCTCTCCTCCAACCACACCCACAGTTTCGCCGTCATCGAGCTCTCCAGCTTCGTCGACGTCACCCCCTGGCACCGCTTCGGCTTCACGGCGGCCAATTCCGCCATCCTAGAAGCCACCGAAGGCTCCTCCGTCGTCCACATCGTCGACCTGAGCTCCACGCATTGCATGCAGATCCCCACACTAATCGACGCCATCTCTACCCGCCATGACGTCCCTCCTTTGATCAAGCTCACAGTAGTAGAATCTTCAAAAAGAGATATCCCACCTAAACTTGACCTCCCCTACGACGAATTGGGCTCGAAGCTTGTCAATTTCGCTAAGTCTAAAAACGTCACGATGGAATTCAGAGTGATATCTTCGGGTCACGAGGACGGTTACGCGGATTTGATCCAGTACCTCCGGGAGCAGCGTGACGTTAATGAAGCCTTGGTTATAAACTGTCACATGACACTTCATCGAATTCCGGACGAAACGTTATATGGGAATTCCATTTCCACTAGTTGGTCGGTGAGATCGATGTTTCTGAAAGCGGTGCGGAGTTTGGACCCAACGCTTGTCATTTTGGTGGAGGAGGACGCGGATTTGACGTCGACTGATTTGGTGTGGAGGGTGAGGTGTGCGTTTAATTACCTGTGGATAGCATACGACACGATGAACACGTTTCTGGGGCAAGGGAGTGAGAAAATTAGGCAGTGGTACGAAGCGGGGATTAGTTGGAGGATTGAGAATGTGATAGCGCAGGAAGGGGTGGAGAGAGTGGAGAGGCTTGAGCGTAGGAGTAAGTGGGTGCAGCGGATGAGGAATGCGGAGTTCCAGGGGATTAGTGCCAGCGACGACGCCGTTTCGGAGCTGAAGGCCATGCTGGCTGAGCATGCCGCTGGGTGGGGATTGAAGAAGGAAGATCAACATCTTGTGCTCACCTGGAAAGGACACAACGTCGTTTTTGCCTCCGCTTGGATGCCTGCTTCCGCGTCTTAA 1362 0.5396 MSTQFTPTLPPFHQSTPFSNPVISNKHQIIARTTSSWPGFPTSKALSGFSDVYNCTEQLLVHCANAIDTNDVSLAQQILWVLNTIAPPDGDPNQRLASSFLRAFTSRAAKSGSSKMLAAVAPAHHPNNLSSNHTHSFAVIELSSFVDVTPWHRFGFTAANSAILEATEGSSVVHIVDLSSTHCMQIPTLIDAISTRHDVPPLIKLTVVESSKRDIPPKLDLPYDELGSKLVNFAKSKNVTMEFRVISSGHEDGYADLIQYLREQRDVNEALVINCHMTLHRIPDETLYGNSISTSWSVRSMFLKAVRSLDPTLVILVEEDADLTSTDLVWRVRCAFNYLWIAYDTMNTFLGQGSEKIRQWYEAGISWRIENVIAQEGVERVERLERRSKWVQRMRNAEFQGISASDDAVSELKAMLAEHAAGWGLKKEDQHLVLTWKGHNVVFASAWMPASAS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2077 453 ProSiteProfiles GRAS family profile. 47 448 IPR005202 -
Bisa01g2077 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 57 437 IPR005202 -
Bisa01g2077 453 Pfam GRAS domain family 57 447 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2077 Bisa-ChrBisa01 36705153 36706514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2077 40 449 GRAS Transcription Factor Family AT3G49950 56.627 2.13e-163 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa01g2077 GRAS 3.5e-92 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2077 01 36705153 36706514 Bisa01g2077 01 36705153 36706514 ECH