Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2071 ATGTCGAAGGCGCGTGTCTACGCGGACGTCAATGTGCTTCGCCCCAAAGAGTACTGGGATTACGAGGCTCTCACTGTTCAATGGGGCGAACAAGATGATTATGAGGTTGTGCGAAAAGTTGGAAGGGGAAAATATAGTGAGGTTTTTGAAGGTATAAACATTAATAGCAATGAGCGTTGTATAATCAAGATTCTCAAGCCTGTCAAGAAAAAGAAGATTAAAAGAGAGATAAAAATACTTCAGAACCTTTGTGGAGGCCCGAATATTGTCAAGCTTTTTGATATTGTCAGAGATCCGCACTCAAAAACTCCTAGCTTAATCTTTGAGTATGTCAACAGTACAGATTTTAAAGTCTTGTACCCAACGTTGACTGATTATGACATACGCTATTACATATATGAGCTCCTCAAGGCCTTGGATTACTGCCATTCTCAAGGCATAATGCATAGAGATGTGAAGCCCCATAATGTTATGATAGATCATGAGTTACGAAAACTTCGCTTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATATAATGTTCGTGTGGCTTCGAGATACTTTAAGGGACCTGAACTACTAGTTGATTTGCAAGACTACGACTACTCATTGGACATGTGGAGCCTTGGCTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCATTCTTTTATGGTCACGACAATCATGATCAGCTTGTCAAAATAGCTAAGGTGCTTGGGACTGATGAATTAAATGCATATCTGAATAAGTATCATTTGGAGCTTGATCCTCAACTAGATGCACTTGTTGGAAGGCACAGTCGCAAGCCCTGGTCTAAATTTATTAATGCAGATAATCAGCATCTTGTGTCTCCAGAGGCAATTGATTTTCTTGATAAACTCCTTCGATATGATCATCAGGACAGGCTCACTGCAAAAGAAGCAATGGCGCATCCATATTTCTCTCAGGTAAGGGCAGCAGAAAGTAGCAGAATGAGAACACAGTAA 1002 0.4052 MSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGININSNERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLFDIVRDPHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAKEAMAHPYFSQVRAAESSRMRTQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2071 333 Pfam Protein kinase domain 34 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2071 333 SUPERFAMILY Protein kinase-like (PK-like) 11 323 IPR011009 -
Bisa01g2071 333 SMART serkin_6 34 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2071 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Bisa01g2071 333 CDD STKc_CK2_alpha 15 319 IPR045216 GO:0004674|GO:0006468
Bisa01g2071 333 FunFam Casein kinase II subunit alpha 20 110 - -
Bisa01g2071 333 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Bisa01g2071 333 Gene3D Phosphorylase Kinase; domain 1 20 106 - -
Bisa01g2071 333 Gene3D Transferase(Phosphotransferase) domain 1 107 332 - -
Bisa01g2071 333 PANTHER CASEIN KINASE II SUBUNIT ALPHA 1 329 IPR045216 GO:0004674|GO:0006468
Bisa01g2071 333 ProSiteProfiles Protein kinase domain profile. 34 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2071 333 FunFam Casein kinase II subunit alpha 111 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2071 Bisa-ChrBisa01 36565901 36574049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2071 32 319 Core Cell Cycle Gene Families AT1G76540 29.773 1.90e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Bisa01g2071 Pkinase 5.3e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1388 11 33293479 33303327 Bisa01g2071 01 36565901 36574049 CCT
Bisa01g2071 01 36565901 36574049 Bisa01g2071 01 36565901 36574049 ECH