Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2030 ATGGCAACGGTTAACAGAAAGGAAATGGATCGGATCAAGGGTCCGTGGAGCCCTGAGGAGGACGGGGCCTTACAGAAGCTTGTAGAGAAACATGGGCCGAGGAACTGGTCATTGATCAGCAAGTCCATTCCGGGTCGCTCCGGCAAGTCTTGCCGGCTTCGGTGGTGCAATCAGCTCTCTCCTCAGGTGGAGCACCGAGCGTTTACACAAGAAGAGGATGACACTATTATTCGGGCTCATGCCCGATTCGGCAACAAATGGGCCACAATCTCCCGCCTTCTCTCGGGTCGAACCGATAACGCCATCAAGAACCACTGGAACTCCACCTTGAAACGGAAGTGCGCGTCCATGATGATTGACGAAACCGCCGGCGCCGGTGCTGGTGGCCACGACGGCAGTTTCAGCCCCCAGCCTCTTAAGAGATCGGTGAGTGCCGGCGCCGCTATGCCGGTATCCACCGGCTTTTATATGAATCATCCAACACCGGCTAGCCCATCCGGATCCGATGTTAGCGATTCCAGTGCGCCCGTTGCTTCTTCTTCCCATGTTTACCGACCCGTAGCAAGAACCGGCGGAGTTCTACCTCCCGTAGAAACGACGTCGTCGTCGAATGACCCTCCCACTTCATTATCCCTATCGCTTCCCGGTGTAGACTCCTCCGAAGTTTCGAATCGTGCTTCAGAATCCACACATGCAGCTCCGCCGACGAACACTATGCATTTGCTATCGGTAATGACTTCGGCGCCGGCACCGACATCCTCCCAGGCTCCGCCGCTGACTCCGGCAGCTGCTGCTATGCCGGTGCAACAGCAGGTTCATTTCGGTCGGGGTGATGGTGGCTCGATGGCGGCGAATCAGAATGGCTTCGCGCCATTCAATTTCAGTGCAGAGCTGCTAGCTGTGATGCAGGAGATGATAAGGAAGGAGGTCAGAAGTTATATGGCGGGATTGGAGCAGCAGAATGCGATGTGTTATCAGGAAGCTGGTGGATTTAGGAACGCTTCGGTGCAGCGAATTGGGATTGGCAGGATCGATTCGTAA 1041 0.5562 MATVNRKEMDRIKGPWSPEEDGALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTQEEDDTIIRAHARFGNKWATISRLLSGRTDNAIKNHWNSTLKRKCASMMIDETAGAGAGGHDGSFSPQPLKRSVSAGAAMPVSTGFYMNHPTPASPSGSDVSDSSAPVASSSHVYRPVARTGGVLPPVETTSSSNDPPTSLSLSLPGVDSSEVSNRASESTHAAPPTNTMHLLSVMTSAPAPTSSQAPPLTPAAAAMPVQQQVHFGRGDGGSMAANQNGFAPFNFSAELLAVMQEMIRKEVRSYMAGLEQQNAMCYQEAGGFRNASVQRIGIGRIDS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2030 346 SUPERFAMILY Homeodomain-like 10 106 IPR009057 -
Bisa01g2030 346 FunFam Transcription factor MYB44 67 113 - -
Bisa01g2030 346 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Bisa01g2030 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 114 IPR017930 -
Bisa01g2030 346 CDD SANT 15 57 IPR001005 -
Bisa01g2030 346 MobiDBLite consensus disorder prediction 158 180 - -
Bisa01g2030 346 PANTHER MYB PROTEIN-RELATED 13 220 - -
Bisa01g2030 346 FunFam MYB transcription factor 13 64 - -
Bisa01g2030 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 63 IPR017930 -
Bisa01g2030 346 MobiDBLite consensus disorder prediction 195 237 - -
Bisa01g2030 346 SMART sant 64 112 IPR001005 -
Bisa01g2030 346 SMART sant 12 61 IPR001005 -
Bisa01g2030 346 CDD SANT 67 110 IPR001005 -
Bisa01g2030 346 Gene3D - 12 64 - -
Bisa01g2030 346 MobiDBLite consensus disorder prediction 158 237 - -
Bisa01g2030 346 Gene3D - 66 124 - -
Bisa01g2030 346 Pfam Myb-like DNA-binding domain 16 74 - -
Bisa01g2030 346 ProSiteProfiles Myb-like domain profile. 8 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2030 Bisa-ChrBisa01 35774086 35775126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2030 1 345 MYB Transcription Factor Family AT4G37260 50.276 7.45e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g2030 Myb_DNA-bind_6 1.1e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0203 05 3107177 3108127 Bisa01g2030 01 35774086 35775126 ECH
Bisa01g2030 01 35774086 35775126 Bisa01g2030 01 35774086 35775126 ECH