Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2026 ATGGCTCTCGCAGAGGAAACTCAAGATTTAGTACAGAACCCAGTGGTCCTAGATGCGCTTCTCTGCGAGGAAGATTGTTTTGAGGAGGAAGGCTTTACGGAGGCAGAGACTTATGACTATGACTACGATTCACCAGTGAGAAAGCCGTCATCTTTGCCTTTGATTATGTGTGACAATGATTTCTTTTGGGAAGACGATGAGCTTGCTTCTCTAATCTCAAAAGAGGGAGGGACCCATTTCCGTTTTAGTAATCTAATCACCGATGGGCCTCTAAAGGAAGCTCGCCAAGAAGCCGTCTTGTGGGTTTCTAAAGTTTGTGCGCACTATAATTTCTCTGCTCTCACCACTGTTCTCGCTGTGAACTACTTCGATCGATTCATCACGAGCTTAAAATTCCAGAGGGACAAGCCATGGACGACACAGCTCGTTGCAGTCGCTTGTTTATCTCTGGCTGCGAAAATGGAGGAGACCCAAGTCCCTCTTCTTTTAGACCTTCAAGTGGAGGAATCCAAGTTCGTGTTTGAAGCGAAAACTATACAGAGAATGGAGCTTCTGGTGTTATCGACTCTAGAGTGGAGGTTGAATCCTGTGACCCCAATTTCCTTCTTCGACCACATTGTGAGAAGACTCGGTTTGAAGAGCCGTTTGCATTGGGAATTCCTCTGGCGTTGCGAGCGTCTTCTTCTTCTAATCATCGTGGATTCAAAAGTCACGAGCTATCTTCCTTCTAAGATAGCTGCTGCTATAATTATCCACGTTATCAGAGAGACTGAACCCTTCAATGCAATGGAATACAGAAGCGAGCTTCTGAGTTTACTCAAAATCAGCGAGGAACAAGTGAACCAGTGCTACAAACACATTCTGAAAATACTATGTTCCCATGAAGACATTCAAAATCTTCAGAGGAAACGGAAACGCCTATCTGAACCGGGAAGTCCAGACGATGTCATTGATGCGTCGTTTAGCTGTGATAGCTCGAACGACTCATGGGCCGTAGGATCTGTCTCTGTCTCGCCGGAGCCAGCTGTCAAGAGAAGCCGATGCAATAATCCTGTGGCTATTAATATTCTTAATGCCTCTGGCTAA 1086 0.4558 MALAEETQDLVQNPVVLDALLCEEDCFEEEGFTEAETYDYDYDSPVRKPSSLPLIMCDNDFFWEDDELASLISKEGGTHFRFSNLITDGPLKEARQEAVLWVSKVCAHYNFSALTTVLAVNYFDRFITSLKFQRDKPWTTQLVAVACLSLAAKMEETQVPLLLDLQVEESKFVFEAKTIQRMELLVLSTLEWRLNPVTPISFFDHIVRRLGLKSRLHWEFLWRCERLLLLIIVDSKVTSYLPSKIAAAIIIHVIRETEPFNAMEYRSELLSLLKISEEQVNQCYKHILKILCSHEDIQNLQRKRKRLSEPGSPDDVIDASFSCDSSNDSWAVGSVSVSPEPAVKRSRCNNPVAINILNASG 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2026 361 CDD CYCLIN_AtCycD-like_rpt2 197 285 - -
Bisa01g2026 361 Gene3D - 196 287 - -
Bisa01g2026 361 FunFam CYCLIN D32 196 285 - -
Bisa01g2026 361 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Bisa01g2026 361 Pfam Cyclin, C-terminal domain 197 303 IPR004367 -
Bisa01g2026 361 PANTHER CYCLINS 86 288 IPR039361 -
Bisa01g2026 361 Pfam Cyclin, N-terminal domain 92 195 IPR006671 -
Bisa01g2026 361 FunFam D6-type cyclin 80 195 - -
Bisa01g2026 361 SMART cyclin_7 100 188 IPR013763 -
Bisa01g2026 361 SMART Cyclin_C_2 197 325 IPR004367 -
Bisa01g2026 361 SUPERFAMILY Cyclin-like 179 299 IPR036915 -
Bisa01g2026 361 SUPERFAMILY Cyclin-like 62 195 IPR036915 -
Bisa01g2026 361 Gene3D - 92 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2026 Bisa-ChrBisa01 35706741 35708083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2026 1 349 Core Cell Cycle Gene Families AT5G67260 49.725 3.78e-101 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2026 01 35706741 35708083 Bisa11g1448 11 34255178 34259231 CCT
Bisa11g1448 11 34255178 34259231 Bisa01g2026 01 35706741 35708083 ECH
Bisa05g0206 05 3147119 3148508 Bisa01g2026 01 35706741 35708083 ECH
Bisa01g2026 01 35706741 35708083 Bisa01g2026 01 35706741 35708083 ECH