Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2022 ATGATTAAGCTTCACTCACACTGCTTCGGCTTCTCATCAATATTCGGCTTCTCCGTCTCCATCTCACCGTCTCCGTCTCATCAATCTTCTCATCAAGAACCCGCAATGGAGGAGCAGATAGACACTGCAGAGAAAAAGTTGCTAGTTGATGTTGTAAAATTGGTACAAAAAAGAGGAATGAAGGGTACAATGGGAGACTGGAAACAATTCTTAAACAGTCATGATAAAGCTGGGGATATGTTGAGTGATCCAGCAAGGAGGTCCCATGAGGTATTGGCTGCATTTTTGAAGACATTTTCAAAGGAGGATGATTTAAAGCTTATTGGTAACATCATGCGATGCCATTCAAATCGAGGCTTACTGGAGTATTTGAAAGATAAATCTCATGACTCCCCTGAGCAGAGGCTTGTCCAGAAAACTCTGCAGCACCCATTGTATCCACTGGATTATTCATTTCCAGAAGTTGATGAGGGATGGGTGATAATAAACCTTAGGAAAAAAAACCGTGTGCTGAAATCTACTGAGATGGTTGCTGTTGACTGTGAAATGGTTCTCTGTGAAGATGGGACTGAAGCAGTAGTGAAAGTCTGTGTGGTTGATCGCAATTTGGAGGTCAAACTAAATAAACTTGTACACCCCCACAAAGCAATTGCGGACTACAGAACAGAGATTACTGGTATCTCCTCTCAAGATCTAGAGGGAGTTACTTGCTCATTGGCTAATATACAGAAATCCATGAAAAAGCTGTTACAAAAGGGAGCTATACTAGTGGGGCATAGTTTACATAATGACCTACACGTGCTGAAGCTAGATTATGCTAGAGTGATTGACACCTCATATATCTTCCAATCCTCGGATAGACCTTTTTACATGAGACCTTCTTTGAATAGTTTATGTAAGGCTGTGTTAGGTTATGAAGTTCGGAAAATGGGTGCTCCGCATAATTGTCTAGATGATGCAACTGCGGCAATGAAACTTGTTCTTGCTAAGATAAAACATGGTATTGATAATGCAATTCCCCTGGTTCAACAGCCTGAAACTGTTCTTGAAAGTGAGATGGCAAAGCTTCTTCTTCACAGGATACCAACTAATGTTAAGAGTGAAGAACTAGATAAAGTTGTTCCTGGGGACTTCACATTAGAACTTAGACCTTCTAAAGGAGGAAAATATTCTGCCTTTGCCATCTTTAAGAATTCCCAAGAGGCCCATGATGCCTATTTAAATGTCCAAGGCAACCAAGAAAAGGATATATCCGGACGTCCACAGAAGCTTGTCACATTTCAGCTCACCACAGGTATGAGTGCCAGTCTATATGTTCGGAAAATGCTACCTGATGGCCCCCATGGGCTGATTCCATCTAAGAGAGCTTTGGAAGTGCATGAAACATCTGAATCCAAGAAAGCAAAGATGGATCCTAAAATTGAAGAGGATGCTAAGACTGACTCTAATATGTGTGACGCCCAGTTGAGTGAGATTGAAGCATTAAATCAACGACTGAAACAAAGTGATTTGGAGATTGAATCGATGAGGCGACAGCTGAAACAAAAGGATTACGAAATTTCCTGTTTGAATAAGCTGGTATCCTCCTTGAAAAAGAAATCGAAGAAATGA 1611 0.4103 MIKLHSHCFGFSSIFGFSVSISPSPSHQSSHQEPAMEEQIDTAEKKLLVDVVKLVQKRGMKGTMGDWKQFLNSHDKAGDMLSDPARRSHEVLAAFLKTFSKEDDLKLIGNIMRCHSNRGLLEYLKDKSHDSPEQRLVQKTLQHPLYPLDYSFPEVDEGWVIINLRKKNRVLKSTEMVAVDCEMVLCEDGTEAVVKVCVVDRNLEVKLNKLVHPHKAIADYRTEITGISSQDLEGVTCSLANIQKSMKKLLQKGAILVGHSLHNDLHVLKLDYARVIDTSYIFQSSDRPFYMRPSLNSLCKAVLGYEVRKMGAPHNCLDDATAAMKLVLAKIKHGIDNAIPLVQQPETVLESEMAKLLLHRIPTNVKSEELDKVVPGDFTLELRPSKGGKYSAFAIFKNSQEAHDAYLNVQGNQEKDISGRPQKLVTFQLTTGMSASLYVRKMLPDGPHGLIPSKRALEVHETSESKKAKMDPKIEEDAKTDSNMCDAQLSEIEALNQRLKQSDLEIESMRRQLKQKDYEISCLNKLVSSLKKKSKK 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2022 536 MobiDBLite consensus disorder prediction 458 481 - -
Bisa01g2022 536 Pfam Exonuclease 177 326 IPR013520 -
Bisa01g2022 536 FunFam Small RNA degrading nuclease 3 171 345 - -
Bisa01g2022 536 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 45 345 IPR047021 GO:0004527
Bisa01g2022 536 SUPERFAMILY Ribonuclease H-like 176 332 IPR012337 -
Bisa01g2022 536 CDD REX1_like 177 328 IPR034922 -
Bisa01g2022 536 Gene3D - 171 341 IPR036397 GO:0003676
Bisa01g2022 536 SMART exoiiiendus 175 336 IPR013520 -
Bisa01g2022 536 Coils Coil 485 512 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2022 172 342 C2H2 Transcription Factor Family AT3G27970 30.928 1.23e-11 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2022 01 35642335 35649157 Bisa01g2022 01 35642335 35649157 ECH