Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2011 ATGAATAGGCCTGGTTGTATCGTCAGAGTTACAGTCACAGTTACTTCCTCCTTCTCCGATGAATTTCCGGCTTCCTCGAAATTGCTCCTCTCCTCCGATGCCGTTTCGCTGCTCTCTTTCAAATCCCAAGCCGACCTCGACAACAAGCTCCTCTACGCTCTCCACGAGCGCTTCGATTACTGCGAATGGGAAGGCGTGAAATGCGCGCAAGGCCGAGTGGTTCGCTTCTTCCTTCCGGGTTTTGGCCTTCGCGGCGTCTTCCCTTCAGACACCCTCACTCGCCTAGACCAGCTCCGCGTCCTCAGTCTCCGCAATAACTCCCTCTCCGGGCCCATTCCCGACCTCTCTGCTCTCTTCAACCTCAAGTCTCTCTTCCTCGACCACAATTTCTTCTCAGGTTCTTTCCCTCCTTCCCTCTTGTTGCTCCATCGCCTTCGTATACTTTCTCTCTCTTATAACAACCTCACCGGTTCCATTCCCCATGAGTTCGCTAATTTGGACGGTTTGATTGCTCTGCGTCTTGATTCGAACCGGTTTAATGGAACCGTTCCGCCGTTGAACCAGTCCTCGCTTCGAATCTTCAATGTGTCCGCCAACGACCTTACCGGACAGATTCCATCGACATTCATCCTTGCTCGATTCGGCACGGCGTCGTTTCTGGGGAACCCGGGTCTCTGCGGGGAGATAATCCACATAGATTGTGAACCTCGATCTCGACTCTTCGGTTCCTCGAATGCCACTGCCTCCTCCGCACCGTTGGGGCAAAGCGCAGATCAATCGCAGACCACGGTGGTTTTCTTTTCACCGACTAGCAAGAAGCATAATAGTACCGGCCTGATTATGGGGTTCACCATTGGGGGAGCGGTTCTGATTGCGTCGTTCCTAGTCGTAATCGCATTGGTTAGAAAACAGAGCAGTTCAAGAAACCTAGAAGAAAGTCCCGAAACGGCGTCGTTGGAAGCCACGGATGCTCCTCCGGTGAAGAAAGTTGAAGAAATCGAAAGGGCTCATAAGAGTGGGAATTTGGTGTTCTGTTGTGGGGAGGCACGATTGTACACGCTGGAGCAGTTGATGAGAGCCTCGGCGGAGTTAATGGGTAGGGGTAGCATCGGTACGACCTACAAGGCGGTGGTGGGCGGGAAGTTCACGTTGACGGTGAAGAGGCTGGATGCAGGTAAGACGGCAACGACGAGCAGCCAAGTGTTCGAGCGACACATGGAAATGGTGGGTCAGCTTCGGCATCCAAATTTGGTGCCGGTTAGAGCTTATTTTCAGGCTGAGGGAGAGAGGCTGGTCATCTATGATTATCAGTCTAATGGCAACCTCTCCAACCTCATTCATGGTTCAAGATCAGCAAGAGCGAAGCCTCTGCACTGGACATCATGCTTGAAGATAGCTGAAGACGTAGCTCATGGACTTGCTTACATACACCAAACATCAAGACTAATCCATGGCAACCTGAAGTCCTCCAACGTCCTTCTCGGAGCAGACTTTGAAGCTTGTGTTACGGACTACAGTTTGGCCCTCCTTGCAGACTCTTCATCCACTGAAGATCCTGATTCTGCAGCCTATAAAGCACCCGAAACTCGTAATTCTAGCCGTCCACCCAGTTCTAAGTCAGATGTCTTCGCCTTTGGGGTGCTTCTGCTGGAGATTTTGACGGCTAAATATCCTTCTCAACATCCCTTTCTGATGCCAACAGATTTGCAAGATTGGGTCAGAGCAATGAGGGATGATGATGGCTACGAAGATAAGCAGCTGGGAATGCTCACGGAGGTCGCCAGTATTTGCAGTGCGATATCGCCTGAGCAGAGACCTGCAATGTGGCAAGCGTTGAAGATGATACAGCAAATCAAGGGGAGTGCAATAGAGAAAGCCATACATTTGTTGGTTAAAAATACAGAAAGCGGTGACAATCATAAAGGCAAATAG 1932 0.5093 MNRPGCIVRVTVTVTSSFSDEFPASSKLLLSSDAVSLLSFKSQADLDNKLLYALHERFDYCEWEGVKCAQGRVVRFFLPGFGLRGVFPSDTLTRLDQLRVLSLRNNSLSGPIPDLSALFNLKSLFLDHNFFSGSFPPSLLLLHRLRILSLSYNNLTGSIPHEFANLDGLIALRLDSNRFNGTVPPLNQSSLRIFNVSANDLTGQIPSTFILARFGTASFLGNPGLCGEIIHIDCEPRSRLFGSSNATASSAPLGQSADQSQTTVVFFSPTSKKHNSTGLIMGFTIGGAVLIASFLVVIALVRKQSSSRNLEESPETASLEATDAPPVKKVEEIERAHKSGNLVFCCGEARLYTLEQLMRASAELMGRGSIGTTYKAVVGGKFTLTVKRLDAGKTATTSSQVFERHMEMVGQLRHPNLVPVRAYFQAEGERLVIYDYQSNGNLSNLIHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQTSRLIHGNLKSSNVLLGADFEACVTDYSLALLADSSSTEDPDSAAYKAPETRNSSRPPSSKSDVFAFGVLLLEILTAKYPSQHPFLMPTDLQDWVRAMRDDDGYEDKQLGMLTEVASICSAISPEQRPAMWQALKMIQQIKGSAIEKAIHLLVKNTESGDNHKGK 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2011 643 ProSiteProfiles Protein kinase domain profile. 359 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2011 643 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Bisa01g2011 643 FunFam Probable inactive receptor kinase At5g67200 32 142 - -
Bisa01g2011 643 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
Bisa01g2011 643 Gene3D Phosphorylase Kinase; domain 1 328 436 - -
Bisa01g2011 643 Gene3D Transferase(Phosphotransferase) domain 1 438 635 - -
Bisa01g2011 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 619 IPR046959 -
Bisa01g2011 643 SUPERFAMILY L domain-like 37 226 - -
Bisa01g2011 643 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Bisa01g2011 643 Pfam Protein tyrosine and serine/threonine kinase 363 611 IPR001245 GO:0004672|GO:0006468
Bisa01g2011 643 FunFam Leucine-rich repeat receptor-like protein kinase 144 236 - -
Bisa01g2011 643 SUPERFAMILY Protein kinase-like (PK-like) 363 618 IPR011009 -
Bisa01g2011 643 Gene3D Ribonuclease Inhibitor 188 238 IPR032675 -
Bisa01g2011 643 MobiDBLite consensus disorder prediction 514 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2011 Bisa-ChrBisa01 35487374 35490845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2011 29 623 Receptor kinase-like Gene Family AT3G50230 54.153 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa01g2011 PK_Tyr_Ser-Thr 1.5e-28 CL0016