Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2008 ATGGAAGGCGAAGGAGGAGAGAGAGAGATGGGGACGAGGAAGAGAGGGGGAGAAGGAGAGAGAAGGTACAAGGGGATTAGGATGAGGAAGTGGGGGAAGTGGGTTGCAGAAATTAGGGAACCCAACAAGCGCTCCAGAATATGGCTCGGCTCCTATTCCACGCCCGTCGCCGCCGCTCGAGCCTATGACACCGCCGTCTTCTATCTCAGGGGGCCCTCAGCTCGCCTTAATTTCCCGGAGCTTCTCGCCGGAGAGGGTTGCGGTGCCGCCGGCGACTTGTCGACGGCTTCAATTCGGAAGAAAGCAACGGAGGTCGGTGCCAGGGTGGACGCCCTTCAGGCAGCCCTCGACCATCATCACCACGCGGCATCGGCGGCGGCGGCGGCACCGGAGCTCGTGCCGCGGGGAGCAGAGTTCGTGGACCGGGTTGACCTGAATAAGATACCCGAACCTGAGAGCTCGGAGTACAACTGA 474 0.6139 MEGEGGEREMGTRKRGGEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLAGEGCGAAGDLSTASIRKKATEVGARVDALQAALDHHHHAASAAAAAPELVPRGAEFVDRVDLNKIPEPESSEYN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2008 157 MobiDBLite consensus disorder prediction 1 21 - -
Bisa01g2008 157 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Bisa01g2008 157 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Bisa01g2008 157 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Bisa01g2008 157 PRINTS Ethylene responsive element binding protein signature 61 81 IPR001471 GO:0003700|GO:0006355
Bisa01g2008 157 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Bisa01g2008 157 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Bisa01g2008 157 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Bisa01g2008 157 CDD AP2 22 81 IPR001471 GO:0003700|GO:0006355
Bisa01g2008 157 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 155 - -
Bisa01g2008 157 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2008 Bisa-ChrBisa01 35443813 35444286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2008 11 155 AP2-EREBP Transcription Factor Family AT5G67190 57.059 1.10e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g2008 AP2 9.7e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1466 11 34540571 34541068 Bisa01g2008 01 35443813 35444286 CCT
Bisa01g2008 01 35443813 35444286 Bisa01g2008 01 35443813 35444286 ECH