Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1996 ATGGGGGATGTGTACGGATACGGTAGTAGTAACATTAATCCCTCTTCATCTTCAAACTCACCTCAAGACAATTTATCCCTTTTTCTGCATCAGATTCTCCTCCCTCCCTCCTCCACACCATCATCGTCTTCCCTCATGCCCAAAAACTCACTCAATGCCTCTAAGCATGAAAATGCACGCCATTCAGACCCTGCTCTTCTCTCTTCTTATATCAAGGGGAATTCTGCAGTAGGAGTGAGTGAGAATGTGTCTGATGAATATGAATGTGAAAGTGAGGGTGATGCTGTTGAAAGAATGGTGGAAGAGGTGCAGGCAAAGCCAGTTCCTCCGAGGAGTTCATATAAGAGAAGCAGAACTGCGGAAGTGCATAACTTGTCTAAAAAGCGAAGGAGGAGTAGGATCAACAAGAAAATGAAGGCTTTGCAGAATCTGATTCCTAATTCAAACAAGATTCTGTCGATGAGAAATGGATTGAGTTTGCATCCTATGTGCTTTCCTGAAGGCTTGCAGCCTCTGCAATTCTCTAAGATGAGAATGTATGGTGAAGAATCCAAGTCTATTCCTTTAAACACAACAGCTACTCTGCCACTTCACGACGCATCTGATCTACCTGACAAATGCACTGTCAGGGACTTCTTTTGGGATTGA 648 0.4367 MGDVYGYGSSNINPSSSSNSPQDNLSLFLHQILLPPSSTPSSSSLMPKNSLNASKHENARHSDPALLSSYIKGNSAVGVSENVSDEYECESEGDAVERMVEEVQAKPVPPRSSYKRSRTAEVHNLSKKRRRSRINKKMKALQNLIPNSNKILSMRNGLSLHPMCFPEGLQPLQFSKMRMYGEESKSIPLNTTATLPLHDASDLPDKCTVRDFFWD 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1996 215 Pfam Helix-loop-helix DNA-binding domain 122 150 IPR011598 GO:0046983
Bisa01g1996 215 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 18 197 IPR031066 -
Bisa01g1996 215 MobiDBLite consensus disorder prediction 36 53 - -
Bisa01g1996 215 Gene3D - 111 177 IPR036638 GO:0046983
Bisa01g1996 215 MobiDBLite consensus disorder prediction 36 62 - -
Bisa01g1996 215 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 116 151 IPR036638 GO:0046983
Bisa01g1996 215 MobiDBLite consensus disorder prediction 8 24 - -
Bisa01g1996 215 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1996 Bisa-ChrBisa01 35108926 35111464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1996 82 178 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 47.541 3.96e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g1996 HLH 5.8e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1996 01 35108926 35111464 Bisa01g1996 01 35108926 35111464 ECH