Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1992 ATGATGGATTGGGTTCGAGGACACTCCATTGGAAGAGGAAGCTTTGCAACCGTCCACTTAGCGATACCCGCGACAGGCACCTCTCAGTTTTCATCTCTGACCGCCGTCAAGTCCTCGGACGTTCTCGGATGTTCTTCCCTCAAGAACGAGAAGCGAGTGCTGGATTGCCTTGGGTTTTGTCCTCAAATTATACGGTGCTTTGGGGATGATTATAGCTTCGAGAATGGTGGTCAGTACTACAATTTGTTTCTGGAATACGCCTCCGGTGGTAGCCTTGCTGTTCATGTGAAGAATTGCGGTGGTCGGTTGCCAGAGTCTGACGTTCGACGGTACACCACGTCGATAGTGAAGGGAATCATGCATATTCATGCGAAAGGCTTCGTGCACTGTGATATCAAGCTTCAGAATATCCTTCTGTTTGACAATGGCGCCGTCAAAATCGCGGACTTTGGGCTTTCGAAGAAAGCAGGGGAGAAGGAGAAACAGAGCAATGAACTGAAGCAGAGCGAATGGAGGGGCACTCCTCTGTTTATGTCGCCGGAATCGGTAAAAGACGGTGTGTATGAATATCCGGCGGATATATGGTCTCTTGGCTGCGCTGTGGTGGAGATGGTGACCGGAAAACCCGCCTGGAAGGGCCAAGAGGGATCGAAATCGAATAATATCTACTCGTTGTTGCTTAGGATTGGGGTAGGAGAAGAGTTGCCGGAAATACCAGATGAATTGTCAGAAGACGGGAAGGATTTTGTGAGGAAGTGTTTGGTGAAGGATCCGGCGAAGAGATGGACCGCGGAGATGCTTCTGAAGCATCCGTTCGTCGCCGGCGACACTGTTGCATTAAATAAGGAGGATGAACAATCGACGTCGCCGAGAAGTCACTTCGATTTTCTCGATTGGGCTTCGTCTGCAACTGCTTCGGTTCCGAATTCGCCGAAATCCGACGAATGGTGTGAATGGAAATTCGAAACGTCATCGTGCGATTCAAGCTTCTACGCGCCGGTGAATCGACTCCGGCAACTGGTGACAGGTCAGGGTCCCAATTGGTGGGAATCGGAATCTGAAAGTTGGGTATGTGTTAGGTGA 1083 0.5023 MMDWVRGHSIGRGSFATVHLAIPATGTSQFSSLTAVKSSDVLGCSSLKNEKRVLDCLGFCPQIIRCFGDDYSFENGGQYYNLFLEYASGGSLAVHVKNCGGRLPESDVRRYTTSIVKGIMHIHAKGFVHCDIKLQNILLFDNGAVKIADFGLSKKAGEKEKQSNELKQSEWRGTPLFMSPESVKDGVYEYPADIWSLGCAVVEMVTGKPAWKGQEGSKSNNIYSLLLRIGVGEELPEIPDELSEDGKDFVRKCLVKDPAKRWTAEMLLKHPFVAGDTVALNKEDEQSTSPRSHFDFLDWASSATASVPNSPKSDEWCEWKFETSSCDSSFYAPVNRLRQLVTGQGPNWWESESESWVCVR 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1992 360 ProSiteProfiles Protein kinase domain profile. 4 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1992 360 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 303 - -
Bisa01g1992 360 Gene3D Transferase(Phosphotransferase) domain 1 2 323 - -
Bisa01g1992 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Bisa01g1992 360 FunFam Mitogen-activated protein kinase kinase kinase 17 3 303 - -
Bisa01g1992 360 SUPERFAMILY Protein kinase-like (PK-like) 4 309 IPR011009 -
Bisa01g1992 360 Pfam Protein kinase domain 6 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1992 360 SMART serkin_6 4 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1992 360 CDD STKc_MAPKKK 3 273 - -
Bisa01g1992 360 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1992 Bisa-ChrBisa01 35031975 35033057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1992 2 360 MAP Kinase Kinase Kinase AT3G50310 51.892 5.95e-122 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa01g1992 Pkinase 6.9e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1493 11 34955228 34956298 Bisa01g1992 01 35031975 35033057 CCT
Bisa01g1992 01 35031975 35033057 Bisa01g1992 01 35031975 35033057 ECH