Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1990 ATGCAATCCTTTCTCCCCCTATCCTGTGGTCCCTCCTCGATCCCCACCGTCCATCTCCTTCCTTCCTCCATTGACCTCTCCGCCATCAATGGTCCAAAATTACTCATCAATCACGTAACCCCACACATCATGGGCGTGTTGGTCGGTTCTAGAGATGATAGTCCATCCATTTCCATCCTGCTATTTTATTCTCTGTCTATCTCTTCCTTCCTTATCCCTCTGATACAAACCCTACTTTCCCTTACCCTCTTTCTCTGCCCTCCCATACTCTCTCTTTCTTTCTCCCTTCACTCATCATCATCATCTCTCCCACTTCCATTCCCGACCCCTTCCCTTCCATCCCTCCCTGTCTCTGAAACCCTCATGGACGTGGATGACAGAAGCATCGACATGATGGCAATGATGATGCAAATGGAAAAGTTCCCAGATTTCCCTGACCCCTTTTACCACAGTCCCACCAATTTCCCAGAACCCCAATCAATCTCCTCCACCACCCTTTCCAATATCAGTCCACCACCTTCCTTCCTCAACACTCATGATCATATTCATATCGATCAAATTCAACAGCAACCCATGACGACGTCGTCTCATCAAGGAAGGCCCTATCCATACTCCGAGAAGAAGAATAATAATTCTATGGCGGCCATGAGGGAGATGATATTCCGAATAGCTATGATGCAACCCATTCACATAGACCCAGAGTCCATAAAGCCACCGAAGAGGAGGAACGTGAAGATATCGAAGGACCCGCAGAGTGTGGCGGCGAGGCACCGGAGGGAGAGGATAAGCGAGAGGATCAGAATTCTGCAGAGACTGGTTCCGGGAGGGACCAAGATGGACACGGCGTCGATGCTGGACGAAGCCATACATTACGTCAAGTTCTTGAAGAAACAGGTGCAGACGCTCGAGCAAGCGGGGGCCAGTAGGCCCGTGGGCTTTGGGTTGCCCACGGGTACTAGTACTAGTGGCAATGTGAATTATTCTACGTTCGTGAAGGCTTACGGCCATCATCATCAACCTTTGAGCATGGTGGCTAGTGGATGTAGTTCTACTTCTATGCAAATGCTCAGCTGA 1074 0.4963 MQSFLPLSCGPSSIPTVHLLPSSIDLSAINGPKLLINHVTPHIMGVLVGSRDDSPSISILLFYSLSISSFLIPLIQTLLSLTLFLCPPILSLSFSLHSSSSSLPLPFPTPSLPSLPVSETLMDVDDRSIDMMAMMMQMEKFPDFPDPFYHSPTNFPEPQSISSTTLSNISPPPSFLNTHDHIHIDQIQQQPMTTSSHQGRPYPYSEKKNNNSMAAMREMIFRIAMMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRPVGFGLPTGTSTSGNVNYSTFVKAYGHHHQPLSMVASGCSSTSMQMLS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1990 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 250 305 IPR036638 GO:0046983
Bisa01g1990 357 MobiDBLite consensus disorder prediction 152 178 - -
Bisa01g1990 357 CDD bHLH_AtIND_like 247 303 - -
Bisa01g1990 357 Gene3D - 245 309 IPR036638 GO:0046983
Bisa01g1990 357 Coils Coil 285 305 - -
Bisa01g1990 357 SMART finulus 252 301 IPR011598 GO:0046983
Bisa01g1990 357 MobiDBLite consensus disorder prediction 153 178 - -
Bisa01g1990 357 Pfam Helix-loop-helix DNA-binding domain 256 295 IPR011598 GO:0046983
Bisa01g1990 357 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 159 330 IPR045843 GO:0003700|GO:0006355
Bisa01g1990 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 246 295 IPR011598 GO:0046983
Bisa01g1990 357 FunFam BHLH transcription factor 249 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1990 Bisa-ChrBisa01 34992500 34993709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1990 124 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 56.522 1.39e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g1990 HLH 2.7e-06 No_clan