Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1981 ATGTCACAACGGTCGGTGCCGGCGCCGTTTCTGACAAAGACGTACCAGTTGGTGGATGATCCGAGCTCGGACGACGTGATATCGTGGAGTGAAAGTGGAGACACGTTTGTGGTGTGGAAGCACGCGGATTTCGCCAAGGATTTGCTTCCCAAATTTTTCAAGCACAACAACTTCTCTAGCTTCGTACGCCAGCTCAACACCTATGGATTTCGAAAGATAGTTCCCGACAAATGGGAATTCGCGAATGAATATTTCAAGCGAGGACGCAAGGAGCTCCTCTCTGAAATCAAACGCCGGAAGACAACACAGTCGCCGGTGCAAGCCCCTGCCGCCGGGATGTCCGGTGGCGGGAATTCCGCATCAAACTCCGGCGGGGACGACATGGGGTCCACCTCCACATCGTCGAGCGATTCAAAGAATAATCCGGGATCGGTGGAGACAACGGCTCCACAATACGCAGAGCTGTCTGGAGAGAACGAGAAATTGAGAAAAGACAACGAAATGCTGAGCTCCGAGCTTGCGGAGGCGAAGAAGCAGTGCGAGGATCTGGTGGTTTTTCTGACGGAGTATCTGAAAGTGGAACCCGATCAGATAAATCGTATAATGCGGCAAGGAAGTAGTGGGTCCAGCCGCGAAGAAGAAGAAGAAAATGATGATTGTGACGAAAAGGCAGTAGGTGAAGGAGGTGAAAGTTTGAAACTGTTTGGGGTTTGGTTGAAAGGAGAGAAAGATGAGGAGAAGAAGAAAATGAGCTCCAACAATGTCAACAACAACAGCAACCACAAGAGGGGACGCGAAGACCAAATGGGCTTTGGTGGTCCTCACCAGAAGGAGTTGAAGACTGCTCAATTCGGTGCTGCTCCTGTGAATGTCATGATCACTTGA 885 0.5062 MSQRSVPAPFLTKTYQLVDDPSSDDVISWSESGDTFVVWKHADFAKDLLPKFFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEYFKRGRKELLSEIKRRKTTQSPVQAPAAGMSGGGNSASNSGGDDMGSTSTSSSDSKNNPGSVETTAPQYAELSGENEKLRKDNEMLSSELAEAKKQCEDLVVFLTEYLKVEPDQINRIMRQGSSGSSREEEEENDDCDEKAVGEGGESLKLFGVWLKGEKDEEKKKMSSNNVNNNSNHKRGREDQMGFGGPHQKELKTAQFGAAPVNVMIT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1981 294 FunFam Heat stress transcription factor B-4 2 100 - -
Bisa01g1981 294 Coils Coil 152 179 - -
Bisa01g1981 294 Gene3D - 2 101 IPR036388 -
Bisa01g1981 294 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1981 294 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1981 294 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1981 294 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 243 IPR027725 -
Bisa01g1981 294 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1981 294 Gene3D - 146 191 - -
Bisa01g1981 294 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Bisa01g1981 294 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1981 294 MobiDBLite consensus disorder prediction 96 162 - -
Bisa01g1981 294 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1981 294 MobiDBLite consensus disorder prediction 201 226 - -
Bisa01g1981 294 MobiDBLite consensus disorder prediction 99 154 - -
Bisa01g1981 294 MobiDBLite consensus disorder prediction 243 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1981 Bisa-ChrBisa01 34903330 34906252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1981 2 243 HSF AT4G36990 61.290 5.80e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa01g1981 HSF_DNA-bind 1.1e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1518 11 35372598 35374638 Bisa01g1981 01 34903330 34906252 CCT
Bisa01g1981 01 34903330 34906252 Bisa01g1981 01 34903330 34906252 ECH