Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1945 ATGTCATCATCGAATTCGCCGTGCGCCGCGTGCAAGTTTCTGAGGCGGAAATGCACGCAAGAATGCCCGTTCGCGCCGTACTTCCCACCGGATAATCCTCAGAGGTTCGCTTGCGTCCACAAGGTGTTTGGCGCCAGCAATGTGGCCAAGCTTCTCAACGAGCTCAACGCCGCCCAGCGAGACGACGCCGTTAAGTCCTTAGCCTACGAGGCGGAGGCTCGTCTCCGTGACCCGGTGTACGGATGCGTGGGGTTCATCTCTGTCCTACAGCAGAGGCTCAAGGCAATACAGAATGAACTCAGCAATGCGAAGAAGGAGCTTGCAACATACATCGGACCTCAGTCTTTTCAAGCCACGCCTCCTGTATTAGGTCCTCATGGAATGATGGCGCAGCAGCATCATCAGGGGAATCTCTATGGTTCCCCTGCTTTTCCGTATGGCAATATGCGGCCTCCGGGGACCATGGCCGGGATGGCAGGGCCGCCGCATCCGCACGGCGGAGTGGTGATTCGTGAACCGACTAATCATCAGCATCATCATCAACAGCAGCAGCAGCAGATGTTGGAGGCGCAGCAATTAGCGGTGGCCATGGCAGCGAGGGAGCAGCAAGAGATGTTTGGGGGTTATGACCAGCATCAGCAAAATCAACATCAACATCAACAGCAAGAGTTTCTGAGGTTTAATGGAGGTGATCAGGGGTTTGAGATGGGTTCGGTTTCAGGAAGTGGGTTTGATAACCAACAGGCGGAAATGTCGCCGTCATTGGCTCTGGGCTCATTTGATAGCGCTTACCTCCTGCAAATGCAGCAAAGCCAAGGACTAACTCATCCGCAGCTTCAGGCGCAGCAAGCGCAAACGCACCAGCCATCGCAGCAACACCACCAACACCAACTACAGACGGAGAGCGCTGACGAGAAGAGAATCGGTCCTTCTTGTTGA 939 0.5495 MSSSNSPCAACKFLRRKCTQECPFAPYFPPDNPQRFACVHKVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGFISVLQQRLKAIQNELSNAKKELATYIGPQSFQATPPVLGPHGMMAQQHHQGNLYGSPAFPYGNMRPPGTMAGMAGPPHPHGGVVIREPTNHQHHHQQQQQQMLEAQQLAVAMAAREQQEMFGGYDQHQQNQHQHQQQEFLRFNGGDQGFEMGSVSGSGFDNQQAEMSPSLALGSFDSAYLLQMQQSQGLTHPQLQAQQAQTHQPSQQHHQHQLQTESADEKRIGPSC 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1945 312 Coils Coil 86 106 - -
Bisa01g1945 312 MobiDBLite consensus disorder prediction 275 312 - -
Bisa01g1945 312 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Bisa01g1945 312 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 217 - -
Bisa01g1945 312 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Bisa01g1945 312 MobiDBLite consensus disorder prediction 275 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1945 Bisa-ChrBisa01 34038997 34039935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1945 1 245 AS2 family AT5G66870 53.755 6.35e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa01g1945 LOB 6.7e-41 No_clan