Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1942 ATGCGTATCAGGGAGGTGTTGAGGGGTTCGGTTGATGTGTTGTGTTTCTGGTACAGTGTAGCAAATGAGGGGACTCTGATCTTCAGTAATTCAAAGATAAAGAAGATGATCCAAGAACTGTTGGGTGCTTCTTCTGGTTTTATAGCCGGAGAGAGGAAAATCTCCCTCAACGCCCCAGGAGTAGTTCTACCACCCCCCACGCCATCTCCTTATCTCCCATCTTCCACCACAACCACCACCACTTCCACCGTCGCCTCCGCCACAGCCACCACCACATCGAACTCAGAAAACCAAAACTTGCGGTGCCCGCGATGCGATTCATCAAACACCAAGTTCTGTTACTACAACAACTACAACCTCACCCAGCCTCGCCACTTCTGCAAGACGTGTCGCCGGTACTGGACCAAAGGAGGTGCCCTGAGAAATGTCCCGATCGGAGGGGGTTGCCGGAAAAACAAGAACATCGGGGTTTCATCCAGCTCGGTGGCAACGAAGACCAGCGCAACCGTGGCTAAGATGAAAACGGCGGCGTCTGAGCTGGGAAGCAGGCTGGGACTTGGCGGTGGCGGGTACGACCAGGACCTTCCGGCAAGCCCCATTTTATGGGGCTCCCCGCAAAATTCTCATCTGTTGGCTCTGCTGAGAGCAAGCCAGAACCAAAACCCTAACCCTAGCCCTAGTCTCGTTCCCATCACCAGTAATGCAGTTACAGTGAAGGAAGAAGGGAACTTCATGGGATCCCACATGATGGGTGAGCCCATGGGCTCAAACGGGCTTTTGGGTGGTCATCGAAGCCCGGGCTTTGATCCTTCACTGGGTCTCATAGGCTCTTTTTGGAGAAGCACTCAGGATCAGCCTCAACAACAATATTGCGGCTTTGCACTGGGTGAGCAGCAAAACAGTGGGATTCAAGAACTCTACCAGAGACTCAGGTCTTCGTCATCATCAGCTAGCTATTGTAACGATGAATCGCCACTATTTCTGAGCAACATGGCTTCTTCTTCCTCCTCTTCTTCATCTTCTTCTTTAGCCATTTTGGAGTCAGCTCCAGTATCTGGGAGTGGAATTGGTTTGGGTTACTGGAATCAACCACTTTCCTGGTCCGATCTTCCCACAACTAACGGTGCATCAGCATATCCATAA 1143 0.5153 MRIREVLRGSVDVLCFWYSVANEGTLIFSNSKIKKMIQELLGASSGFIAGERKISLNAPGVVLPPPTPSPYLPSSTTTTTTSTVASATATTTSNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNIGVSSSSVATKTSATVAKMKTAASELGSRLGLGGGGYDQDLPASPILWGSPQNSHLLALLRASQNQNPNPSPSLVPITSNAVTVKEEGNFMGSHMMGEPMGSNGLLGGHRSPGFDPSLGLIGSFWRSTQDQPQQQYCGFALGEQQNSGIQELYQRLRSSSSSASYCNDESPLFLSNMASSSSSSSSSSLAILESAPVSGSGIGLGYWNQPLSWSDLPTTNGASAYP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1942 380 Pfam Dof domain, zinc finger 98 154 IPR003851 GO:0003677|GO:0006355
Bisa01g1942 380 ProSiteProfiles Zinc finger Dof-type profile. 100 154 IPR003851 GO:0003677|GO:0006355
Bisa01g1942 380 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 92 298 IPR045174 GO:0003700|GO:0006355
Bisa01g1942 380 MobiDBLite consensus disorder prediction 73 98 - -
Bisa01g1942 380 ProSitePatterns Zinc finger Dof-type signature. 102 138 IPR003851 GO:0003677|GO:0006355
Bisa01g1942 380 MobiDBLite consensus disorder prediction 65 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1942 Bisa-ChrBisa01 33966371 33972656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1942 64 164 C2C2-Dof Transcription Factor Family AT5G65590 59.406 4.84e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa01g1942 zf-Dof 3.4e-32 No_clan