Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1933 ATGCCGTCTAACTCCGGCGATAATCCCCGACCGTCCAAGCCTCAAGCTCCGCCACCGGAACAAGAGCACCTCCCATGCCCTCGCTGCGACTCCACCAACACCAAGTTCTGTTACTACAACAACTACAACTTCTCCCAGCCTCGCCACTTTTGCAAGTCTTGCCGCCGCTATTGGACTCACGGCGGAACTCTCCGTGACATCCCCATCGGCGGTGGCAGTCGCAAAAACGCGAAACGCTCTCGCACCGCTGCCTCCGCTGTTTCTTCCTCCGTCACGGCGACTTCTTCGGCTTCCGCTCAGGACCACCCGTTGCCTACAACCCCTGTATTTGTACCCATCTCGGCTAACCAAGGAGCGTCTATGCCGTTCGGAGGACCCGGCGGTGGAGTCGACGGTGAGGTGAAATCTAATATGGGTATGTGTGGAAGTTTCACTTCTTTGCTTAACAACACTGCCCAAGGACCTGGGTTTCTTGCTCTGGGCGGGTTCGGGCTCGGGCTCGGTCACGGCTTTGAAGACATCGGTTTTGGGAGTGGAAGAGGGGGTTGGGCTTTTCCCGGAATGGTAGATGGATCTAACATTGGTGGTGGCGTTGGGGCTTCTGGCGTGGGGAATTCCTGGCAGCTAGAAAGTGGCGAAGGTGGGTTTGTTGGTGGAGACTGCTTCTCTTGGCCTGGACTGGCAATTTCAACACCTGGAAATGAAGGAATTAGTGGAGGAACATACGACATTCAATTATTCAATGGTGGGTTTGTAAACTGTTTTGTTCTTTGCTATTTTGGTGTAAGTTTGTTTCAGTATCACAAGCATCCTTCCAATTGGGATCCACAGTTCAGTGCAGGGGATGACTGGAAGCGGATATTAGAGTATAGGGATGAGAGCCAGAGACTGGATCAGAGCAGTCGTCTCTATGACTCTTCATTTTCAAATAATGGGTTTGAGTTTGATGCGAGCCATATGGTTCAGGAACTTGCCGGAATCAACGCTGCCACGGAACGACAGAAAGATTTGCTGCAGGAACTGATGTCTGTTGTTAAAGATATGTTACGCAACACAGAGGTGGCTGTTCATTCTTTTCTGATGCTACGTCCAAGGTTCATTCATCCAAGTGTGGGAAACGCTTCTAGTGCCACTGCTCCATCACTGACTCCTGGAGCAACTGTAGCACCTAGTTTGGGTAACCGACCCTCGGTTGCATCTATAGTGCCTGTGCTTGATTTCTACAGTGGACTTCCAAAAAAGCCAACACCCTTCTTACAGCAAACAGTTTCAAGATTTGAGAAGTATCTCCGTGAATGCTGCCAGTGGATTGAAGAGTTAGAGCAGCTGCTTCATTTAGACTCTGAGAGAAGCACTTCTAATAATGGATCCTCAATATTGCAATCTCTTCCCAAGGTCATGACAAATGTGCATGACGTTTTTATTCATGTGGCTTCAAAGGTAGAGAGCATTCATCAGTACATTAATTCAATGAAATCAGCTTACCTAGCTGAACAGCGCAGCCGGGGGGAGGTGAATGATCCCTTTCTAGAGGCTGATCGTCGAGAAACAGCAAGACAACAAACTGCCTCAAAAAGATTTCATCCAACATTGCATTTACCTGCAAATTCACAACCGTCAACACAAGTTGCTGGGTTGTTTTCCAGTTCTGGAATACAAGGAGCATTGCCTGCTCCACATGCATCTCCACTAACTTCAAATTCATCTGGAAGTGGGCTCTCAGCTTTTAGCATATCTTCTTCAGCTCCATCTTCCTCTGTGCCATCTTTGTTTACAACCCCAACAACTTCTGCTGCAGTATCTTCTATTTTTGGATCGTCAAGTGCCATGCCCCAAACCTCGCCTTTTAATTCTTCATCAGGTTCCTTGTTTGGTTCGACTCCCTCTCAGTTTGGTAGTACTGCTCCGTCATTTGGTACAACTCCCGGAGTTTCCCTCTTTTCAACACCATTTGCTTCAGGTGCTACCACAGGATCAGGGGCAAGCTTTGGGTCGGTAAAACTCTCACAGCTGCTGTTACGTCGTCGAAGGATGGATTCTCGCTGTCATTTTCTCCCTTGTTCGAAACGAAAACCCAAAGCCTCAATTATAGAATCAAATAGAACGATATGTGGGTTCTTGCTATTGAATCAAGCTTGTAAAGGGACGTTGAATTACGTTAAAACCCAAGAAGGTGTCCACTCTGCTCAAATCGGGTGGCCGTACGGTCACAGCTCTGGATTGGTTGCCTCTGGGATCCATCCAAAGCAGGCAAGTCAGGTCCGTTCAATTTCTGAGTGCTATAAACCGTTGATGGTGTTGACGGAGTCTCTTCCTCCAGAGGACACTGAGATATTGGTGGGTGTGGTCTAG 2352 0.4843 MPSNSGDNPRPSKPQAPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPIGGGSRKNAKRSRTAASAVSSSVTATSSASAQDHPLPTTPVFVPISANQGASMPFGGPGGGVDGEVKSNMGMCGSFTSLLNNTAQGPGFLALGGFGLGLGHGFEDIGFGSGRGGWAFPGMVDGSNIGGGVGASGVGNSWQLESGEGGFVGGDCFSWPGLAISTPGNEGISGGTYDIQLFNGGFVNCFVLCYFGVSLFQYHKHPSNWDPQFSAGDDWKRILEYRDESQRLDQSSRLYDSSFSNNGFEFDASHMVQELAGINAATERQKDLLQELMSVVKDMLRNTEVAVHSFLMLRPRFIHPSVGNASSATAPSLTPGATVAPSLGNRPSVASIVPVLDFYSGLPKKPTPFLQQTVSRFEKYLRECCQWIEELEQLLHLDSERSTSNNGSSILQSLPKVMTNVHDVFIHVASKVESIHQYINSMKSAYLAEQRSRGEVNDPFLEADRRETARQQTASKRFHPTLHLPANSQPSTQVAGLFSSSGIQGALPAPHASPLTSNSSGSGLSAFSISSSAPSSSVPSLFTTPTTSAAVSSIFGSSSAMPQTSPFNSSSGSLFGSTPSQFGSTAPSFGTTPGVSLFSTPFASGATTGSGASFGSVKLSQLLLRRRRMDSRCHFLPCSKRKPKASIIESNRTICGFLLLNQACKGTLNYVKTQEGVHSAQIGWPYGHSSGLVASGIHPKQASQVRSISECYKPLMVLTESLPPEDTEILVGVV 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1933 783 MobiDBLite consensus disorder prediction 1 26 - -
Bisa01g1933 783 Gene3D - 414 504 - -
Bisa01g1933 783 MobiDBLite consensus disorder prediction 65 86 - -
Bisa01g1933 783 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Bisa01g1933 783 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 285 651 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Bisa01g1933 783 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Bisa01g1933 783 MobiDBLite consensus disorder prediction 507 522 - -
Bisa01g1933 783 MobiDBLite consensus disorder prediction 507 544 - -
Bisa01g1933 783 MobiDBLite consensus disorder prediction 523 544 - -
Bisa01g1933 783 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1933 Bisa-ChrBisa01 33827398 33837681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1933 264 669 NAC Transcription Factor Family AT4G37130 56.872 5.06e-134 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa01g1933 zf-Dof 2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1933 01 33827398 33837681 Bisa01g1933 01 33827398 33837681 ECH