Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1923 ATGGCGGCTAAGCTTGAAGGTGATGATAATCTTGTTCGCGTGATACCCAGTTCAGACCGATTCACTTTGCATCCAGAAATGTTTGATTACCAGAAAAACTTTGCTATTATGCTCACGATCTTCATGGTTTACTCAACAAGAGCAGAAGGGTCGACCAGTTGTCAAAGCAAGTGCGGAGAAAATTCTGTGATGTACCCTTTCGGATTCTCTGGGAATTGCAAGATCAAGTTAAACTGTAGTAGCAGCCACCTCATGGAAATTGGCAAATTACGGGTCCAGAAAGTAACCTCTAGCAGTATATTCATCAATCTTCCAGCGAAATGCAAACAAAATATGACAATTATCAACCCCCTTTTCGGCAAAAACTTTGCTCCCACTAGGAATAATACCCTTCTCGCGCAAAATTGTTCATCTGCGCCTGGCGGCTGCCTTGTTCATACCAGTCTAATGGGCAATCAGTTTAAGTTGGAGAGCTGCGAGAAGAGTAACGGTAATATCAATTGCTTGACGCAATTGCAAACCGAGAAGGATTTAGATGTTCTGACATACGCGGATGTGAATCGAAGTGGGTGCAAGTACTTGTTCTCAGCGATTGCTTCTCAAGAGGGCAAAGACCAAGCCGTTTTGCTGCAGCTTCAGATGCTTGAGTTAGGGTGGTGGCTTGAAGGGAATTGTTCATGCTCTCACAACGCAAACTGTAACCCGGTCCGTTTTGCTGATAAGAAGTGTGGGTATCGATGCCAATGCGCTGTGGGTTACATCGGCGATGGGTTCAAGAATGGCACTGGTTGCCGTAGAGTTTCTCATTGCAAGGCTGAAACAGTCATGTCTGGCGGATGTGGAATAGCAACTAAAATCGGTGTTCTTGTTGGAGGGATTATTGCTGTTATTCTCTTCATGGCTGCTTTGTGTCTTCGTTGTTACTTTGCCCACACTCGTTTGAGAAAACGAGTGACAGTGAAGCGCCTATTGCGTGAAGCTGCAGGCAACTCTAGTGTTCCTTTCTACCCGTACAAAGAAATAGAAAGAGCCACTAATTTTTTCTCTGAGAAAAAGAGGCTAGGAACTGGGGCTTTTGGTACAGTATATGCAGGAAAACTACACGATGATGAATGGGTTGCAATAAAAAAAATTAAGTATAGAGACACCAACAGCATTGACCAAGTGATGAATGAGATCAAACTTCTTTCTTCTGTGAGTCACCCTAATTTAGTTCGCCTCTTGGGTTGCTGCATTGAGGGGAGCGAGCAAATACTTGTTTATGAGTTTATGCCCAACGGGACTCTATCTCAACATTTACAAAGAGAGCGGGGTGCAGGACTTCCCTGGACAATACGGCTTACCATTGCCTCTGAAACAGCTAATGCTGTAGCATATCTCCATTCTACCATTGATCCCCCAATTTATCACAGAGACATAAAATCCAGTAACATACTCTTGGATTACAACTTCAAATCAAAAGTTGCCGACTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCGCATATCTCAACCGCCCCACAAGGGACTCCAGGCTATGTCGACCCTCAATACCATCAGAACTTTCATCTCTCTGATAAAAGTGATGTCTATAGTTTTGGGGTGGTATTGGTAGAGATAATAACTGCCATGAAAGTGGTTGATTTTGGTCGACCTCAGAGTGAGGTTAATTTGGCTGCACTTGCTGTTGATAGGATTAGGAGGGGTTGTGTGGATGAGATTATAGATCCTGTCCTCGAGCCGCTCAGAGACGCTTGGACACTTCACTCTGTTCACAAGGTGGCGGAACTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCCACTATGATGGAAGTGGCAGAAGAGCTTGAACACGTCAGACGCAGTGGATGGGCGGCAAGGGAGGAAACTACACGCATGGCATCATTAATAGAAATGGTTTACACTTGA 1941 0.4451 MAAKLEGDDNLVRVIPSSDRFTLHPEMFDYQKNFAIMLTIFMVYSTRAEGSTSCQSKCGENSVMYPFGFSGNCKIKLNCSSSHLMEIGKLRVQKVTSSSIFINLPAKCKQNMTIINPLFGKNFAPTRNNTLLAQNCSSAPGGCLVHTSLMGNQFKLESCEKSNGNINCLTQLQTEKDLDVLTYADVNRSGCKYLFSAIASQEGKDQAVLLQLQMLELGWWLEGNCSCSHNANCNPVRFADKKCGYRCQCAVGYIGDGFKNGTGCRRVSHCKAETVMSGGCGIATKIGVLVGGIIAVILFMAALCLRCYFAHTRLRKRVTVKRLLREAAGNSSVPFYPYKEIERATNFFSEKKRLGTGAFGTVYAGKLHDDEWVAIKKIKYRDTNSIDQVMNEIKLLSSVSHPNLVRLLGCCIEGSEQILVYEFMPNGTLSQHLQRERGAGLPWTIRLTIASETANAVAYLHSTIDPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEVNLAALAVDRIRRGCVDEIIDPVLEPLRDAWTLHSVHKVAELAFRCLAFHSDMRPTMMEVAEELEHVRRSGWAAREETTRMASLIEMVYT 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1923 646 SUPERFAMILY Protein kinase-like (PK-like) 329 621 IPR011009 -
Bisa01g1923 646 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Bisa01g1923 646 FunFam Wall-associated receptor kinase-like 20 424 633 - -
Bisa01g1923 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Bisa01g1923 646 Gene3D Transferase(Phosphotransferase) domain 1 424 641 - -
Bisa01g1923 646 Pfam Protein kinase domain 348 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1923 646 Gene3D Phosphorylase Kinase; domain 1 308 423 - -
Bisa01g1923 646 SMART serkin_6 348 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1923 646 ProSiteProfiles Protein kinase domain profile. 348 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1923 646 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 38 629 IPR044652 GO:0004672
Bisa01g1923 646 FunFam Wall-associated receptor kinase-like 14 315 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1923 Bisa-ChrBisa01 33636713 33641998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1923 34 628 Receptor kinase-like Gene Family AT2G23450 55.281 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bisa01g1923 Pkinase 4.8e-45 CL0016