Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1913 ATGAAGACATCAAGTACATCAGCAGCTGAAACTTGTAAGCAGCAAGACACTAGAGTAATACCTACTGTAACTGGTTCACCTAGTAATTTAGATGATAAGTGGAATGAAATTGTCGCTCAGGCTGCAGATTCAAGGTTGTTGCATACCAAAGGCATGAAGTTAACATCTGTGAATGAAATAGTTGGTCCAAAATCTATTGAACCTGATAGTAAGAAACGACAATGCATGGCTTATATTTTAGGCAAGGGAAGACAGTGTGTGAGATGGGCAAGTGATGGTGATATATATTGTTGTGTGCATTTGTCCTTGCGTTTTCTCAATAGAGCAGAAAGACCCGTTTCAGTTGATACTCCAATTTGTGAAGGTACAACAGTTCTTGGTACTAGATGCAAGCATCGGGCAATACCTGGTTCTTTGTTCTGCAAGAAACACCAGCCTCATGGTGAAACAGATCATGCCTCAAATTTACCTCTGAATATATTAAAGAGGAAACATGAAGAAAACTATACTGTTTCAGAGAGCATGTTCTGGAGAGACATGGCATTGGTAGATATTGGAAGTCCGGAGTCAGTCATGGATGGTGATGCCCCCAATGGGAGAAGTAACTTAAATGGGAGGCCCAATGATTTTGGAAATGATCATCAAGCAATCGGGGAACTTCACTGTATAGGCTCACCACCCTATAATAACAACCCTTGTTTGGAAGCTCGAAGCTGGTATTTCTTGTACTGTGAAAAGCACCTTCCAAGCTGGCTTAAACGTGCTAGAAATGGAAAGGATAGGATAATTTCAAAAGAGGTTTTTGCAGAGCTTTTGAGGGACTGCTTCTCTCTGGAGCAGAAGGCACATCTACATAAAGCATGCCAGCTTTTTCACAGACGATTTAAAAGCATTTTATCCCTGAGAAATCCAGTTCCTGAGGAAGTCCAATTCCAGTGGGCTTTGACTGAAGCTTCTAAAGATGCTAGTGTTGGAGAATTCTTTACAAAGTTGGTTCATTGTGAGAAAGAGAGAATCAAATTAATTTGGGGATTTCATGGCGACAAAGAGGTATCTGCATTTGTGGAAAATACCCCTCTCTTGTCATCTGCAGTTAATGATGGCTTTGATAATGAAAATGTGATTAAGTGCAGGATGTGCTCTGCAGAATTTCCTGATGAGCAAGCTCACGGCAGCCATGGGATGAACAATCATAAAAAGGAAACACAGTGGCTGTTTAGAGGTTATGCATGCGCCATTTGCCGTGATTCTTATTCTAACCAGAAAGCCTTAGAAACCCATGTCCAGGACAGACATTGTGTGAAGTTTGTTGAACATTGCATGCTTTTACAATGCATTCCATGTGGCAGTCATTTTGGAAATACTGAACAGTTAGGGCTGCATGTTGCATCAGTTCATCCTGTTAATTTCAGACCATCAAAAGCTCTTGAGCAGCAAACTCTGACTCTGTCCACCGGCGAGGATTCTGCAATAGAACTTGAGCAGGGGAATCCAGCCTCATTGGACAATAATTCTGAGAATCCAGCTGCTCATATGGGGCCTGATAAAGTTAGCCGTCGCCCCTCAAAGAGGGGAGTTCGTTGTTATGCTTATAGATTAAAATCTGGCAGAATTAGCCATCCTAGATTTATAAAAGGTTTGGCAGCAACATCATATAGGATAAGAAGTAGGACAAGTGCTAATTTAAAGAGGCGCATTCGGGCAACAAAGTCACTTGGCATAGGGGGAATAACTGTACAACCTCATGTCGCTAGGACAAGTATTGATAGACTGGCCAAATATCAATACTCGGCAGTTGCAAAGGTTTTGTTTTCTGAGATTCAGAAGACCAAACCTCAGCCTAATAATTTTGATCTTCTATCAATTTCTCAATCTGCTTGCTGCAGAGCTAGTCTTATAACCTCACTGGATGAGAAATATGGAGTATTGCCTGAGAAACTGTATTTAAAGGCAGCAAAACTTTGCAGTGAGCATCACATTCCAGTGAACTGGCACCAGGAGGATTTTCTTTGTCCTAAGGGCTGTGAGTTGTTGAAGGACCAGTCTTTTCTCTCTCCCTTAGCATCTCTTGCTAATGGTTTTGTGAGAAAAAAATCTCTAAAACCATTAGATTCTGCTAGTAATGAGTGGGATGTGGATGAAGTTCACTGTGTCATTAACTCGCACCATTTAAAACCAGGGTCCTTGCAAAAGGATATAGTCTTATGTCATGACATAAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTAATAGATCAAACCCTTTTAAATTCTCTTCATACGCTTGGGACCAATCCACAAGATATAAACCTCTCTATGCCTTGGGAGAGCTTTACCTATATTACAAGGCCAATGCTTGACCAATCCCTTAGTCTTGAAGCAGAGAATATGCAATTGGGATGTTCTTGTTCATGTTCTTCTTGCTCTCCCGAAACATGTGATCATGTATACCTTTTTGATAACGACTATGATGATGCAAAGGACATTTTTGGGAAACCTCTGCGTGGCAGATGCAATAAAACCTGTCCCAATAGAATTTTGCAGAATGGAGTACAAGTTAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGTTGGGCAGTAAGGGCTGGTGAAGCTATCCTCCATGGAACGTTTGTGTGCGAGTACATTGGAGAGGTTTTGGATGAGCAGGAGGCACACAACAGGCACATGAGATATGGCAAAGATGGTTGCAGTTATTTCTATGCCATCAACGCTCATGTCAATGATATGTGCAGATTGATTGAAGGACAGGATCAATATGTGATTGATGCTACCATATATGGAAATGTCTCTAGGTTTATCAATCACAGCTGCTCACCCAATCTTGTGAATCACCAAGTTCTTGTAGAGAGCATGGATTGTAAGCGTGCACATATTGGTTTTTATGCAAGCAGAGATATTGCTATGGGTGAAGAACTGACATGCTACTATCACTATGAGCTTGTGCCTGGAGAAGGATCTCCTTGA 2991 0.4122 MKTSSTSAAETCKQQDTRVIPTVTGSPSNLDDKWNEIVAQAADSRLLHTKGMKLTSVNEIVGPKSIEPDSKKRQCMAYILGKGRQCVRWASDGDIYCCVHLSLRFLNRAERPVSVDTPICEGTTVLGTRCKHRAIPGSLFCKKHQPHGETDHASNLPLNILKRKHEENYTVSESMFWRDMALVDIGSPESVMDGDAPNGRSNLNGRPNDFGNDHQAIGELHCIGSPPYNNNPCLEARSWYFLYCEKHLPSWLKRARNGKDRIISKEVFAELLRDCFSLEQKAHLHKACQLFHRRFKSILSLRNPVPEEVQFQWALTEASKDASVGEFFTKLVHCEKERIKLIWGFHGDKEVSAFVENTPLLSSAVNDGFDNENVIKCRMCSAEFPDEQAHGSHGMNNHKKETQWLFRGYACAICRDSYSNQKALETHVQDRHCVKFVEHCMLLQCIPCGSHFGNTEQLGLHVASVHPVNFRPSKALEQQTLTLSTGEDSAIELEQGNPASLDNNSENPAAHMGPDKVSRRPSKRGVRCYAYRLKSGRISHPRFIKGLAATSYRIRSRTSANLKRRIRATKSLGIGGITVQPHVARTSIDRLAKYQYSAVAKVLFSEIQKTKPQPNNFDLLSISQSACCRASLITSLDEKYGVLPEKLYLKAAKLCSEHHIPVNWHQEDFLCPKGCELLKDQSFLSPLASLANGFVRKKSLKPLDSASNEWDVDEVHCVINSHHLKPGSLQKDIVLCHDISFGKESVPVICVIDQTLLNSLHTLGTNPQDINLSMPWESFTYITRPMLDQSLSLEAENMQLGCSCSCSSCSPETCDHVYLFDNDYDDAKDIFGKPLRGRCNKTCPNRILQNGVQVKLEVFKTEKKGWAVRAGEAILHGTFVCEYIGEVLDEQEAHNRHMRYGKDGCSYFYAINAHVNDMCRLIEGQDQYVIDATIYGNVSRFINHSCSPNLVNHQVLVESMDCKRAHIGFYASRDIAMGEELTCYYHYELVPGEGSP 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1913 996 ProSitePatterns Zinc finger C2H2 type domain signature. 411 432 IPR013087 -
Bisa01g1913 996 Pfam Zinc finger C2H2-type, 3 repeats 411 510 IPR040689 -
Bisa01g1913 996 Gene3D SET domain 715 990 IPR046341 -
Bisa01g1913 996 SMART c2h2final6 443 466 IPR013087 -
Bisa01g1913 996 SMART c2h2final6 375 398 IPR013087 -
Bisa01g1913 996 SMART c2h2final6 409 432 IPR013087 -
Bisa01g1913 996 MobiDBLite consensus disorder prediction 496 523 - -
Bisa01g1913 996 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 5 507 - -
Bisa01g1913 996 SMART set_7 854 992 IPR001214 GO:0005515
Bisa01g1913 996 ProSiteProfiles SET domain profile. 854 986 IPR001214 GO:0005515
Bisa01g1913 996 Pfam SET domain 865 985 IPR001214 GO:0005515
Bisa01g1913 996 SMART preset_2 736 844 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa01g1913 996 SUPERFAMILY SET domain 729 988 IPR046341 -
Bisa01g1913 996 ProSitePatterns Zinc finger C2H2 type domain signature. 445 466 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1913 Bisa-ChrBisa01 33421295 33431704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1913 5 993 C2H2 Transcription Factor Family AT2G23740 44.518 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa01g1913 SET 2.2e-17 No_clan