Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1909 ATGGGAATAGCAGCAACACCGCAGCTTGTTCCGTCAATTCTCTCTCACTTCGTCTCCACCAAGAAAACTGATAATAATTGTTCCAATTCTATGTCCCAAGATTACCACCAAGGAATCTTCACCTTCTCCAATGGGTTCGACAGATCCACCATAGCTCAGCAGCAGCAGCAGCAACAGCACTTGGCCCAGCAGATCCGGAGGGACAAGGTGAGGGTGCAAGGGGGCTTCGACGCCCCGCCGCCGCCATTAGTGGCCATGGTGGAAGATTCTGGAAACCTCCCCGTGTACCATGAAAACGCGGGGATGTTATCGGAGATGTTCAATTTCCCTCCAGCTGCCGCCGCTGAGTTGTTGGAGCAGCAACAACAACCGTCGTCCAGGTCGCAACCGCAACAGCCGGTGGCGTCGGACAACGAATGGTACGGAAACAGACAAGGGATGTTGAGTGGGTTGGGACCGTTGGGAGATTCAAAGAATCATCATCAGAGTAGCCGCGACAGTCACAGCAGTAGTATGCTGGAGCATCATCAACATCATCACCATCATCATCCTCAGATTTCAAACATAAATGCGGACTCAGCCGCTGCCATGCAGCTTTTCCTCATGAACCCACAAACAAGATCGCCCTCCCCTCCTACTCATCATCATAACCACACTCCTCCTCCTCCTTCTTCCACTTCTCTCCAAGGTTTCACTCCGTCTGGAGGAGGGGGTTTTGGTCAGTTCACATGGGTTCCCGAGGCCGCCAGCACTACTACTAACCCGCCTGAAATCGGAGGGGTGGTTGAAGCCCAAGGTCTTTCCTTATCGTTGTCCTCTTCCTTACAACACTTGGAAGCCGCAAAAGCTGAGGAATTGAGGATGGGGGAGAGTGGGTTTTTGTTTTACAACAATCAAGGATCTGGAGGAGGGTCTTCGTCGGCTCAGTATCCCTACAAGACATTAATGCATTTCCAAGGGCCCGTGTCCATCGGAGTTGGGCAGAACCACCAGGGACATGTGGGGTTCGGTTCGTCCTTAGGGGTGGTGAATGTGCTGAGGAATTCCAAGTATGTGAAGCCTGCCCAGGAATTGCTCGAAGAGTTCTGTAGTGTTGGGAGAGGGCAGTTCAAGAAGAACAAGTTCAGTAGGCACAATTCTAACCCTAGCTCCAATCCTAGTGCTGCTGCTGCTTCTTCGTCTTCGTCAAAGGATCCTCCTCCTTTGTCTGCCGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAGCTTCTATCCATGCTTGAGGAGGTCGATAGAAGATACAACCACTACTGCGAGCAAATGCAGATGGTGGTGAACACATTCGACGTGGTGATGGGTTTCGGGGCGGCGGTACCATACACGGCCTTAGCTCAAAAGGCTATGTCTCGTCATTTCCGGTGCCTGAAGGACGCGATAACGGCGCAGCTGAAGCACAGCTGTGAGCTTCTGGGAGAGAAAGACGGAGGAGGAAGCTCAGGCCTGACCAAGGGCGAGACCCCGAGGCTGAAGCTTCTCGAACAAAGCCTGAGGCAACAGAGAGCCTTCCACCAGATGGGCATGATGGAGCAGGAAGCATGGCGACCCCAGAGAGGCCTTCCAGAACGATCCGTCAACATTCTGCGAGCCTGGCTCTTCGAACATTTCCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGCCTTTCAAGAAATCAGGTATCAAACTGGTTCATAAATGCCAGGGTCCGTCTGTGGAAACCCATGGTAGAAGAGATGTACCAACAAGAACTTAAAGAAGCAGAGGGTGCAGAAGAGACAGAAGAAAGGAACCAAAGCAACAACAGCAACCTCGCACAAACTCCAACCACAGCAGCAACAACTTCAACAGCAACAGCGCCACCACCACCCCCAACAACATCATCAACAACAACAACAGCGACACCTACAACAACACCCACAACAACAGGCAGAAGATCCCATATCAATGCTCATGAAAGCGACCCTTCACTCAATGCAATCAATACACAACCCTTCTCGGAAACCCAACCAAACCCCTCTAACTCCACCACCACCGTCATAGGGGAGTTGGCGCCACCACCTGCGTCGCAGTGTTACGATTCAGAGCTGCCCCCACACAGATCTATGGCTACTGATGACACGTGTCGGCATGGCAGCTTGGTTGCAGCAGATTACGGGACCGCTTCTGCCAATGCTGACATGGGTTCGACTCTCATAAGGTTCGGGACCACCGCCGGTGACGTGTCACTCACCTTAGGGCTACGCCACGCTGGGAACATCCCCGAGAAAGCTCCTTTCTCTGTTAGAGACTTTGGAGGCATTTAA 2343 0.5237 MGIAATPQLVPSILSHFVSTKKTDNNCSNSMSQDYHQGIFTFSNGFDRSTIAQQQQQQQHLAQQIRRDKVRVQGGFDAPPPPLVAMVEDSGNLPVYHENAGMLSEMFNFPPAAAAELLEQQQQPSSRSQPQQPVASDNEWYGNRQGMLSGLGPLGDSKNHHQSSRDSHSSSMLEHHQHHHHHHPQISNINADSAAAMQLFLMNPQTRSPSPPTHHHNHTPPPPSSTSLQGFTPSGGGGFGQFTWVPEAASTTTNPPEIGGVVEAQGLSLSLSSSLQHLEAAKAEELRMGESGFLFYNNQGSGGGSSSAQYPYKTLMHFQGPVSIGVGQNHQGHVGFGSSLGVVNVLRNSKYVKPAQELLEEFCSVGRGQFKKNKFSRHNSNPSSNPSAAAASSSSSKDPPPLSAADRIEHQRRKVKLLSMLEEVDRRYNHYCEQMQMVVNTFDVVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGGGSSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEAEGAEETEERNQSNNSNLAQTPTTAATTSTATAPPPPPTTSSTTTTATPTTTPTTTGRRSHINAHESDPSLNAINTQPFSETQPNPSNSTTTVIGELAPPPASQCYDSELPPHRSMATDDTCRHGSLVAADYGTASANADMGSTLIRFGTTAGDVSLTLGLRHAGNIPEKAPFSVRDFGGI 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1909 780 CDD homeodomain 527 588 IPR001356 GO:0003677
Bisa01g1909 780 SUPERFAMILY Homeodomain-like 529 594 IPR009057 -
Bisa01g1909 780 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 183 614 - -
Bisa01g1909 780 Pfam Homeobox KN domain 544 583 IPR008422 GO:0003677|GO:0006355
Bisa01g1909 780 MobiDBLite consensus disorder prediction 118 186 - -
Bisa01g1909 780 SMART HOX_1 527 591 IPR001356 GO:0003677
Bisa01g1909 780 FunFam BEL1-like homeodomain protein 4 530 592 - -
Bisa01g1909 780 Pfam Associated with HOX 345 474 IPR006563 -
Bisa01g1909 780 ProSiteProfiles 'Homeobox' domain profile. 524 587 IPR001356 GO:0003677
Bisa01g1909 780 Gene3D - 530 592 - -
Bisa01g1909 780 SMART prehox3 340 475 IPR006563 -
Bisa01g1909 780 MobiDBLite consensus disorder prediction 609 629 - -
Bisa01g1909 780 MobiDBLite consensus disorder prediction 373 409 - -
Bisa01g1909 780 MobiDBLite consensus disorder prediction 375 400 - -
Bisa01g1909 780 MobiDBLite consensus disorder prediction 118 143 - -
Bisa01g1909 780 MobiDBLite consensus disorder prediction 597 701 - -
Bisa01g1909 780 Coils Coil 590 610 - -
Bisa01g1909 780 MobiDBLite consensus disorder prediction 159 173 - -
Bisa01g1909 780 MobiDBLite consensus disorder prediction 204 233 - -
Bisa01g1909 780 MobiDBLite consensus disorder prediction 642 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1909 Bisa-ChrBisa01 33372683 33378980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1909 741 780 Homeobox Transcription Factor Family AT2G23760 69.048 2.92e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa01g1909 POX 3.2e-51 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1611 11 36934938 36940567 Bisa01g1909 01 33372683 33378980 CCT
Bisa01g1909 01 33372683 33378980 Bisa01g1909 01 33372683 33378980 ECH
Bisa01g1909 01 33372683 33378980 Bisa11g1611 11 36934938 36940567 ECH