Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1906 ATGGGTTGGTTTACGAAGTTGCTCAAGGGCTCCAACCATAAAATTTCAGGCGGACAATACCATGGGAAATATGGAAGTGACGAAATTTGGTATCCTCATCATAATTCAGTGGATGATTTGGCAGATATTGAGAAAGAAGCCATCGATTGTGCAATCGCAATCTCTCTATCAGAGGAGGACCCGAAAGGGAAAAAAGTTATTGAGGATGACTCTGAATTGGAAGAAGATGAAGAACTTTGGAAAATTGAAGAGGAGGAAGATGACCATCTTGGTAAAGCTCAACCAGAGGAAGATGAACTTCCTGCTTACATTCAAAAGGAGGAAGATGAACGTCTTGCAAAAGTTCAACTTGAGGAAGATGAACAACTTGCAAGGGCAATTCAAGAAAGTTTAAACATGAGCTCTCCTCCTCGGTCTGACACTGGTTCTTTATCTCAACCATTCCCACCCCTCTTTCCACCTGGATACAGGATCTGTGCTGGCTGCAATGCTGAGATTGGCCATGGAAGATTTTTAAGCTGCATGGGAGGTGTCTGGCACCCAGAATGTTTCCGCTGCCGAGCTTGCAATCAGCCAATTACTGATTATGAGTTTTCCATGTCTGGCGATCGCCCGTACCATAAGTCCTGCTACAGGGAGCAGCATCACCCTAAATGTGATGTTTGCAGGAACTTTATCCCAACAAATTCTGCTGGTCTTATTGAATATAGAGCACATCCTTTCTGGCTACAAAAATACTGTCCATCACATGAACGTGATGGCACTCCTCGTTGTTGTAGTTGTGAAAGAATGGAGTCAAGGGATGCAAAATATCTTTTGCTTGATGATGGCCGTAAGCTATGTCTGGAGTGTCTGGACTCTGCAATAATGGATACTCATGAATGCCAACCACTTTACCTTGAAATACAAGAATTCTATGAAGGTTTAAATATGAAAGTGGAGCAGCAAGTTCCTATGCTTTTGGTTGAGAAACAGGCACTGAATGAGGCCATGGAGGGAGAAAAAAATGGTCATCACCACTTACCTGAAACTAGGGGCCTTTGCTTGTCAGAAGAGCAGACTGTCACCACTATTTTAAGGAGACCAAAGATTGGTGCAGGTTACCGGGTCATAGACATGATAACTGAGCCATATAGGCTGATCCGTCGCTGTGAAGTTACTGCCATTCTTGTTTTATATGGCCTTCCTAGGTTGTTAACAGGATCAATCCTGGCTCATGAGATGATGCATGCATGGCTCAGGCTCAAAGGTTACTCCAATCTGAGCCCAGAGGTAGAAGAGGGAATTTGCCAAGTCTTGGCTCATATGTGGTTAGACTCAGAGATATATTCTGTATCCGGTAGTGAAGGTGCATCATCATCGTCCTCGTCATCGTCCTCACCTTCTTCCTCTTCCTCCATGTCATCAAAGAAGGGTAAAAGGTCTGACTTTGAGAAGAAACTGGGTGAATTTTTTAAACACCAGATTGAGTCAGATACCTCGTCAGCTTATGGAGAAGGATTCAGACTGGGTAATGAGGCAGTGCTCAAGTATGGGCTAAGAAGGACGCTTGACCATATCCGAATGACAGGAAGTTTTCCATATTGA 1587 0.4379 MGWFTKLLKGSNHKISGGQYHGKYGSDEIWYPHHNSVDDLADIEKEAIDCAIAISLSEEDPKGKKVIEDDSELEEDEELWKIEEEEDDHLGKAQPEEDELPAYIQKEEDERLAKVQLEEDEQLARAIQESLNMSSPPRSDTGSLSQPFPPLFPPGYRICAGCNAEIGHGRFLSCMGGVWHPECFRCRACNQPITDYEFSMSGDRPYHKSCYREQHHPKCDVCRNFIPTNSAGLIEYRAHPFWLQKYCPSHERDGTPRCCSCERMESRDAKYLLLDDGRKLCLECLDSAIMDTHECQPLYLEIQEFYEGLNMKVEQQVPMLLVEKQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTILRRPKIGAGYRVIDMITEPYRLIRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYSNLSPEVEEGICQVLAHMWLDSEIYSVSGSEGASSSSSSSSSPSSSSSMSSKKGKRSDFEKKLGEFFKHQIESDTSSAYGEGFRLGNEAVLKYGLRRTLDHIRMTGSFPY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1906 528 ProSiteProfiles LIM domain profile. 157 217 IPR001781 -
Bisa01g1906 528 FunFam Protein DA1-related 1 153 212 - -
Bisa01g1906 528 MobiDBLite consensus disorder prediction 449 474 - -
Bisa01g1906 528 Pfam LIM domain 159 214 IPR001781 -
Bisa01g1906 528 ProSitePatterns LIM zinc-binding domain signature. 159 193 IPR001781 -
Bisa01g1906 528 SMART lim_4 158 210 IPR001781 -
Bisa01g1906 528 Pfam Protein DA1 308 523 IPR022087 -
Bisa01g1906 528 PANTHER PROTEIN DA1-RELATED 2 3 528 IPR045218 -
Bisa01g1906 528 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 151 184 - -
Bisa01g1906 528 MobiDBLite consensus disorder prediction 449 470 - -
Bisa01g1906 528 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 185 240 - -
Bisa01g1906 528 CDD LIM_DA1 159 211 - -
Bisa01g1906 528 SMART uim 118 137 IPR003903 -
Bisa01g1906 528 SMART uim 43 62 IPR003903 -
Bisa01g1906 528 Gene3D Cysteine Rich Protein 153 216 - -
Bisa01g1906 528 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 118 137 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1906 Bisa-ChrBisa01 33237924 33242791 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa01g1906 DA1-like 3.4e-106 CL0126