Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1876 ATGTCTTCGCCGTCCCCTGATTCTGCTCCGTCTTCAGATCAAGACAATACAAATAGTTCTAGCCCTTCATCATCACCCTCTTCAAGTAATCAAGGTAATAGTAATTCTACATCCCCAAGCCCTCCCTCATCCCCATCCTCACAAAACCCCCCATCATCTGACTCACCTCCCACTTCGGATTCCTCATCGAACTCACCGACTCCGCCTTCCAATTCAAGATCGCCATCAAGCTCTTCAGATTCACCGCCTTCGTCTGATAAAAACCCTCCTGATTCCGAGGCTGGTGATAAATCTAAAAACTACTCACCGTCGGGTTCGAAAGGTAATTTAAACCCGAAATCCAGCGGCGGCTCAAAATCGCCGCCGCCTGCGCTGCCTGGAGACCAAAAAAGCAACGGCGGTAGCAGTGGCAACAGCGATGCGATCATCGGGGCTGCCTTGGGGGCTGCGTGTCTTCTGCTTATCATCGTGTGTCTGATTTGCTGCAGAAGGAGGAAGAAGAGAAAGGAAATGTACTATTATGACGAACCTAAGGGAGAGTCTGCCAAATCTGGGGATTACAAGAAAACCGGGCAAGACCACGTGGTCAGGATGCAGCAGTCGCCGAACGGAGGGGGTATGGGTCCCAACAGTGGCAGCAGCGGGTGGGGGGCAGTGCCTCCCCACAGCGCCGACATGAGCTCCAACTACTCCCTGGGCCCTCCGCCGCCTCTGCCTCCGCCGTCCCCCACCCTCAGTCTGGGCCTCATGGGCGGCGGCACCTTCACCTACGAAGACCTGGCGGCCGCCACCGAGAATTTCGCCGAGAAGAACCTGTTGGGACAGGGTGGCTTCGGCTATGTCCACAAGGGCGTCCTGCCTAACGGAAAGGAAGTGGCCGTTAAGAGCCTGAAGGCGGGAAGTGGGCAGGGAGAGCGTGAGTTTCAAGCCGAGATTGACATGCTCAGTCGCGTCCATCATCGCCATCTTGTGTCGCTTAATGGCTACTGCATTGCTGGTGGACAGAGAATGCTGGTTTACGAGTTTGTTCCCAATATGACTCTTGAGCATCACCTTCATGAAAAAGGTTTGCCTACCATGTCTTGGCGCGATAGAATGCGGATTGCAGTGGGGTCTGCCAAAGGGCTTGCTTACCTTCATGAAGATTGTCATCCTCGAATTATTCACCGGGATATCAAATCTGCTAATGTCCTCCTTGACGATAGCTTCGAAGCCAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTACTGATAATAACACTCATGTCTCAACTCGCGTCATGGGAACATTCGGGTACTTGGCTCCAGAATATGCATCAAGTGGAAAATTGACAGAGAAGTCGGATGTGTTCTCGTTCGGAGTGATGTTATTAGAACTTATAACGGGGAAGCGACCTGTGGATGTGCTAAATGTGATGGATGATAGTTTGGTGGACTGGGCTCGACCGCTGCTTTCGCGAGGGCTGGAGGATGGGCACTTCGAAGAGTTGGTGGACCCATTTTTGGAAGGGAATTATGATCAACAGGAATTGTCTCGCATGGCTGCCTGCGCTTCCGCCAGCATTCGTCATTCTGGCAAGAAGCGTCCTAAGATGAGCCAGGTAGTAAGAGGATTGGAAGGAGATGTTTCATTGGACGACTTTAACGAGGCAAAGCGAGGGCAGGCCAACGTGCTAGCGTCTCCATCAAGCTCAGAATATGACTCCAGCACATATCAGGCCGATATGAAGAGGTTCCGTCAGATAGCTCTGGCCAGCCAGGAATTCGGCAGCAGCGACGGCGGCTCTAGCCAAGAGATGTCCCACAACCGCCCCAGCATTCCAAGGAATCCCTATGAAGTGAACGATGATGAGAGTGATGGTTCTGATGGTTTCGAGGGAGAGCAGATGCAATGGAAGGCTATCATAGAGGGATTGACAGTGAAGGAGATGGAAGAAGCTAAGGGAGATGGAAGAAGAAGTCAGCGTCAACAGCGAGGGAGAGCAGAGACAATAGTAGGCTATCATAAAGGCGTCGACTGTGAGGGAGATGGAAGAAGCTGA 2043 0.5228 MSSPSPDSAPSSDQDNTNSSSPSSSPSSSNQGNSNSTSPSPPSSPSSQNPPSSDSPPTSDSSSNSPTPPSNSRSPSSSSDSPPSSDKNPPDSEAGDKSKNYSPSGSKGNLNPKSSGGSKSPPPALPGDQKSNGGSSGNSDAIIGAALGAACLLLIIVCLICCRRRKKRKEMYYYDEPKGESAKSGDYKKTGQDHVVRMQQSPNGGGMGPNSGSSGWGAVPPHSADMSSNYSLGPPPPLPPPSPTLSLGLMGGGTFTYEDLAAATENFAEKNLLGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDMLSRVHHRHLVSLNGYCIAGGQRMLVYEFVPNMTLEHHLHEKGLPTMSWRDRMRIAVGSAKGLAYLHEDCHPRIIHRDIKSANVLLDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDVLNVMDDSLVDWARPLLSRGLEDGHFEELVDPFLEGNYDQQELSRMAACASASIRHSGKKRPKMSQVVRGLEGDVSLDDFNEAKRGQANVLASPSSSEYDSSTYQADMKRFRQIALASQEFGSSDGGSSQEMSHNRPSIPRNPYEVNDDESDGSDGFEGEQMQWKAIIEGLTVKEMEEAKGDGRRSQRQQRGRAETIVGYHKGVDCEGDGRS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1876 680 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Bisa01g1876 680 SUPERFAMILY Protein kinase-like (PK-like) 247 539 IPR011009 -
Bisa01g1876 680 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 149 592 IPR047117 -
Bisa01g1876 680 MobiDBLite consensus disorder prediction 1 136 - -
Bisa01g1876 680 Pfam Protein tyrosine and serine/threonine kinase 270 470 IPR001245 GO:0004672|GO:0006468
Bisa01g1876 680 MobiDBLite consensus disorder prediction 644 659 - -
Bisa01g1876 680 MobiDBLite consensus disorder prediction 589 627 - -
Bisa01g1876 680 ProSiteProfiles Protein kinase domain profile. 267 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1876 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Bisa01g1876 680 FunFam Proline-rich receptor-like protein kinase PERK1 343 550 - -
Bisa01g1876 680 Gene3D Phosphorylase Kinase; domain 1 248 342 - -
Bisa01g1876 680 FunFam Proline-rich receptor-like protein kinase PERK8 244 342 - -
Bisa01g1876 680 MobiDBLite consensus disorder prediction 644 680 - -
Bisa01g1876 680 MobiDBLite consensus disorder prediction 666 680 - -
Bisa01g1876 680 MobiDBLite consensus disorder prediction 53 88 - -
Bisa01g1876 680 MobiDBLite consensus disorder prediction 589 605 - -
Bisa01g1876 680 SMART serkin_6 267 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1876 680 MobiDBLite consensus disorder prediction 1 42 - -
Bisa01g1876 680 MobiDBLite consensus disorder prediction 197 240 - -
Bisa01g1876 680 Gene3D Transferase(Phosphotransferase) domain 1 343 557 - -
Bisa01g1876 680 MobiDBLite consensus disorder prediction 95 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1876 Bisa-ChrBisa01 32628482 32636041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1876 115 595 Trihelix Transcription Factor Family AT1G70460 50.704 1.71e-151 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa01g1876 PK_Tyr_Ser-Thr 1.8e-46 CL0016