Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1851 ATGGGAACCGATAACGGTCAAGTAGTGGAGACATTACGAAAACCCCGCTCCTTCCAGGTACATCGTAGAATGTGCATAGAACTCATGAAATTAGTTGAGAAAATGTCGAGGATATTTCCGGATATAGAGGCAGCACGACCTCGGTGCTCATCAGGAATAGAGTCTCTGTGCTTGCTAAATAATGCAATTGAAAAAGCCAAACTTCTACTGCAGTATTGCTGCGAATCCAGTAAACTCTACCTGGCTGTGACAGGAGATACAGTACTCTCAAGATTCCTAAAAGCAAGAAAATCATTGGAGCAAAGCTTAGGCCAAGTTCAGAGTATAGTTCCAGTTATGTTGGCTGCAGAGATATCTCAAATAATTGACAATCTTGCATGCACGACACTTGCCCTGGATTCAGCTGAAGTAGAGGCTGGAAGGGTTGTGAAAGAATTGCTCCAGCAGGGTGCTTCAACCTCGGATTCTGTAGAAAATTCTGAAATTAAAGCTCTTCAATTTGCAGCAGCAAGACTTGATATCACATCCCCAAAGGCCATCTTACTAGAGAAACGATCTATTAAGAAGTTGCTAGACAAAGTTGGCCCAAATGAGCAGACAAAAAAGAAGATATTGAAATATCTTTTGTATCTGTTGAAAAAGTATGGAAACTTTATCACGGAAGAACAAATGGAAAAAGTCTATGCTTATAATGAAGGATCAATTGCAACTGAGAACTCCAGTCACAATTCTCTACGTACTCATTATGTTGAACTGGACCGATGCTTGAATTATGATCAGTATAAAACTCACGACAATGAGTTGGGTAAAGCACTTACCCCTGAGGAGTACAAGTGCCCAATATCTTCAAGATTAATGTATGATCCTGTTATTATTGCTTCTGGAGTAACATATGAAAGAATGTGGATACAGAAATGGTTTGAAGAGGGCAAGGATATATGTCCAAAAACTGGGAAGAAACTAACCCATATGTTATTGACTCCAAATATTGCCATGAAGGACTTGATATCTAAGTGGTGCAGAAATAATGGAGTCACCCTTCCTGACCCAGATCAGCAAGCGGAAGATTGGGAAAAGGTTTCCTCCACTTCTATTAGGAGCTTTGGCAGTTCTATGATGGATTTGCATTTGCCAGTGGATCTTAGTGGCATCTCACTTGGATCATTAGATAATAGTCAGAGTTCTGATTCCTCACATGCTAGGAGCATTCAAAGCTTGAATTTGATGTTGAAGGCCAATGACAATTCTCAGAGTCATCACCCTAATATGCATGTACATGACACTGATCTGGTACTTTTCTCCAAACTCCCTGACCTTGAATGGGACTCTCAATGCCAGGTCATTGAAGATCTGAAAAATCATTTGAAATGCAATTGCCCTGTTTCTTGTTCTGTGTCTTCCAAGGATTTCATTGAACCTCTCAACAGATTTCTGAGTAATGCATATGAACTTCAAGATGTAAAAGCTCTAAGAGCTGGAACTCAGTTGTTGATGGAATTTGTGAACAACTGCGGGAAGGATCTGACTTGTTTAAGTGAAGGCACATTCAGCAGGCTGGCAAGTTTTCTTGATTTGGAATTAATAGATGAAGCTCTTTCCATAATGGAAAGATTGTCTGGGCAGCATAACAAAGCTACAACTGCAACATCCAGTGTGCTCACTTCCATCTTAAAGATCCTCGAGTCCGAGAGCAGAGAGTTCCAACAACAAGCTGTTAGAATAATGTATAATCTGTCCTTCATCGATGAAAATTGCTCCCGCATGGTATCTCTTGGGTGCATCCCAAAATTGCTGCCATTTTTTGAAGACAAGTCCCTGTTAAGATACTGTATATGTATATTGGAAAACCTTTGTGATACGGAAGAGGGCAGGGTCTGTGTTGCCAAAACAGAAGGATGCATATGTTCAGTTGCTGATATACTTGAGAATGGCAGTGATGAGGAGAAAGAGCATGCACTGGCAGTTTTACTCGCTTTATGCTCCCAACGTGTGGATTATTGTCAGTTGGTGATGGACGAGGGAGTCCTAATTATCCCTTCGCTCGTCAGTATCTCCGTCAATGGAAACGACAAAGGAAGGGAGAGAGCATTGGAGTTGCTCCGTCTCTTGAGGGATGTTGAATATGATGAACATGAAGAGTGTTTTCCACCAAATCTCGATGCTTCTCAAGCTTCTGACAATCACTCTCAAGAAAAGAAATCATCCAAGACATCTGGACTTCTCAAAAAACTGTCATGGTTCTCGAAGTCCAGTTTGCATGCATCAAAAAGTAAGAGATGA 2280 0.4096 MGTDNGQVVETLRKPRSFQVHRRMCIELMKLVEKMSRIFPDIEAARPRCSSGIESLCLLNNAIEKAKLLLQYCCESSKLYLAVTGDTVLSRFLKARKSLEQSLGQVQSIVPVMLAAEISQIIDNLACTTLALDSAEVEAGRVVKELLQQGASTSDSVENSEIKALQFAAARLDITSPKAILLEKRSIKKLLDKVGPNEQTKKKILKYLLYLLKKYGNFITEEQMEKVYAYNEGSIATENSSHNSLRTHYVELDRCLNYDQYKTHDNELGKALTPEEYKCPISSRLMYDPVIIASGVTYERMWIQKWFEEGKDICPKTGKKLTHMLLTPNIAMKDLISKWCRNNGVTLPDPDQQAEDWEKVSSTSIRSFGSSMMDLHLPVDLSGISLGSLDNSQSSDSSHARSIQSLNLMLKANDNSQSHHPNMHVHDTDLVLFSKLPDLEWDSQCQVIEDLKNHLKCNCPVSCSVSSKDFIEPLNRFLSNAYELQDVKALRAGTQLLMEFVNNCGKDLTCLSEGTFSRLASFLDLELIDEALSIMERLSGQHNKATTATSSVLTSILKILESESREFQQQAVRIMYNLSFIDENCSRMVSLGCIPKLLPFFEDKSLLRYCICILENLCDTEEGRVCVAKTEGCICSVADILENGSDEEKEHALAVLLALCSQRVDYCQLVMDEGVLIIPSLVSISVNGNDKGRERALELLRLLRDVEYDEHEECFPPNLDASQASDNHSQEKKSSKTSGLLKKLSWFSKSSLHASKSKR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1851 759 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 347 IPR013083 -
Bisa01g1851 759 SUPERFAMILY ARM repeat 523 714 IPR016024 -
Bisa01g1851 759 MobiDBLite consensus disorder prediction 716 738 - -
Bisa01g1851 759 Pfam U-box domain 274 343 IPR003613 GO:0004842|GO:0016567
Bisa01g1851 759 ProSiteProfiles U-box domain profile. 272 346 IPR003613 GO:0004842|GO:0016567
Bisa01g1851 759 CDD RING-Ubox_PUB 274 326 IPR045210 -
Bisa01g1851 759 Pfam Kinesin-associated protein (KAP) 533 660 - -
Bisa01g1851 759 Gene3D - 442 714 IPR011989 -
Bisa01g1851 759 SMART Ubox_2 276 339 IPR003613 GO:0004842|GO:0016567
Bisa01g1851 759 SUPERFAMILY RING/U-box 269 349 - -
Bisa01g1851 759 SMART arm_5 581 619 IPR000225 GO:0005515
Bisa01g1851 759 SMART arm_5 663 705 IPR000225 GO:0005515
Bisa01g1851 759 SMART arm_5 540 580 IPR000225 GO:0005515
Bisa01g1851 759 PANTHER U BOX DOMAIN-CONTAINING 25 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1851 Bisa-ChrBisa01 32180758 32184608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1851 11 713 U-box Gene Family AT4G36550 38.696 9.72e-151 455