Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa01g1843 | ATGGCGCTACAGAGGGAGAATCCTTCAAGGTTTGAACACGAAATCACATCCCCTTCGCCAATAAGGCATCATAGTAAGTCACCCAGTTGGGTTAAAAATGGCACTGTAAGTACTAACAGAAAGCATGATCATTCAGAAACATTACAAGAAGAGAAAAAACAAAGAGAACCTTCCCATTTGAAAGCTGCTTCAATCGGAAAAATCAACGAAATGATTGCCCAGTCAAACAGAGCAAATGGTGTTCAGAAAAACAGAGCAAATGGTAATCTTAATACGACCTCATCAAGCTCTGCTAGTGAAAAGGCAAGTGCTAAAATCACAGGGAACAAGAAAAAGAGGCAAAAAGGGGCATGGTTTGCTTGTATAAGAGAAGACTCATGTAAGACGTCAAAAAAATCACCTGAACGTCGAAGAATTGATGAAGCTTACTTCATTGAGAGAGCTGTCATAGTCGAAAGTCTCCCTCAATTCTGGGCAGATAAGTACCAACCTGCTTCCTTCAACGCCTTCATTTGCCACAAACAAGAAGCCCAACTTCTCAAGGAATTAGTGTCTGAGGACGTATTTCCTCATATTTTGCTAAAAGGTCCCTCTGGTTCTGGCAAAAGAGCACTAACAATGGCTTTTTTACGAGAAATATATGGAGATGAGTGTTGGAATCTATCCCATAATTTACGATATTTTCCCATTCAGGAAGGAAGGCCTGTGAAAGTGACTGTTCCGATAACGTCCAGTTCTCATCACGTGGAGCTTAATGTGAATTTCGAACCAAATGCTAAATACGCTTTGAGGGGGTTAGTCAAGGAAATAAGCTGTATACATGCAATAACACCCGAAGACGGCAACGTGAACTTGAAATCAGATTGTAAAGTGATACTTCTTTATGAGGTTGACAAAGCCGTACAGAGCATCCAGCACCTAATAAAATGGGTTATAGACAACCATTCTGATGTATGCAAACTGGTACTCTGCTGCGAAGACGATGTAGACATTCTTGAACCTGTGAGAAACTTGTTCAAAGTGATTGAAGTTGATCCACCTCCCACTCACCAAATTATGGAGGTTCTTATTCAGATAGCAAAGAATGAGGACATTGATCTATCCAGGAATTTTGCTGCTAAAATTGCTGCAAAATCAAATCAGAATGTCAGGAAAGCAATCATGGCTCTTGAAGCATGCAAAGCATTCAAATATCCATTTTTGGAAGAGCAACCAATTCCGGTCGGATGGGAGGAGATCCTAGTAGAAATTGCTTTAGACATCCTAGCTGATCCATCAAACTCAGGCCTAATCTCAGTAAGCGATAAACTTCAGAGGCTTCTGGAGGATTTTGTCCACCCAAAACTGATTCTCCAGAAACTGGTGGAAGAGCTTCTAAAAAGGATCGAGGCAAGCTTGAAAAGAGAACTCTACTACTGGCATGCTTATTACCACAAAAGACTCCCACCTGGAACTGTAGCTTTACCAAAATTGGAAGAATTTGTGGCCAAGTTTATGAGCATATACCGAAAGACCTCTGCTAGTAGGCAACATGAGTAG | 1539 | 0.41 | MALQRENPSRFEHEITSPSPIRHHSKSPSWVKNGTVSTNRKHDHSETLQEEKKQREPSHLKAASIGKINEMIAQSNRANGVQKNRANGNLNTTSSSSASEKASAKITGNKKKRQKGAWFACIREDSCKTSKKSPERRRIDEAYFIERAVIVESLPQFWADKYQPASFNAFICHKQEAQLLKELVSEDVFPHILLKGPSGSGKRALTMAFLREIYGDECWNLSHNLRYFPIQEGRPVKVTVPITSSSHHVELNVNFEPNAKYALRGLVKEISCIHAITPEDGNVNLKSDCKVILLYEVDKAVQSIQHLIKWVIDNHSDVCKLVLCCEDDVDILEPVRNLFKVIEVDPPPTHQIMEVLIQIAKNEDIDLSRNFAAKIAAKSNQNVRKAIMALEACKAFKYPFLEEQPIPVGWEEILVEIALDILADPSNSGLISVSDKLQRLLEDFVHPKLILQKLVEELLKRIEASLKRELYYWHAYYHKRLPPGTVALPKLEEFVAKFMSIYRKTSASRQHE | 512 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa01g1843 | 512 | MobiDBLite | consensus disorder prediction | 21 | 36 | - | - | |
| Bisa01g1843 | 512 | Gene3D | - | 349 | 400 | - | - | |
| Bisa01g1843 | 512 | Gene3D | - | 409 | 502 | - | - | |
| Bisa01g1843 | 512 | Gene3D | - | 156 | 347 | IPR027417 | - | |
| Bisa01g1843 | 512 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 409 | 502 | IPR008921 | GO:0003677|GO:0006260 | |
| Bisa01g1843 | 512 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 152 | 394 | IPR027417 | - | |
| Bisa01g1843 | 512 | MobiDBLite | consensus disorder prediction | 37 | 60 | - | - | |
| Bisa01g1843 | 512 | MobiDBLite | consensus disorder prediction | 78 | 110 | - | - | |
| Bisa01g1843 | 512 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 155 | 500 | - | - | |
| Bisa01g1843 | 512 | MobiDBLite | consensus disorder prediction | 78 | 104 | - | - | |
| Bisa01g1843 | 512 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
| Bisa01g1843 | 512 | FunFam | replication factor C subunit 3 | 349 | 406 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa01g1843 | Bisa-ChrBisa01 | 32104453 | 32112179 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa01g1843 | 157 | 503 | Core DNA Replication Machinery Family | AT5G27740 | 37.784 | 3.85e-76 | 242 |