Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1821 ATGGCTGAGGTTGCGGTATCCATAGTTGTTGAAAAGCTTTCAGAATTGCTACTCGAACAAGCAGCAAAAGCAATTTCAGAGCTAAATGGGGTGCGGGACGACGTGGAGAAGCTAAAGATTGATCTGCGATGGATGCAGTCCTTTCTGAGGGATGCCGATGCCAAACAAGAAGAAAACCAAATGATTCGCATGTGGATTTCTGAGATTAGAGATGTTGCTTTTGAAGCAGAAGAACTGATAGAAATCTTTGTTTACAAAGCATTATGTCAAAGCAGATGGGACAGAGTCTTCAGATCCTTTCATCTCTACGACATGGCCAGAAGAATCGACAAAATTCGGTCTAGGATACATGATATATCTGAAAAGCGTGAAAACTATGGCGTTGTCGGCTACAAACGAGATGAAGGACAGGGTAGTACCAACGAGAGGCTGAGGCATTGGAGACAGCCATCGCCCTACACTGAAGAGGAGTATGTTATTGAGCTTGAGGATGCCATGGAGTTTCCACTCAGTCAACTGCTCACACTGGACAAAAGGCGTCAAGTGGTTTCAATAGTTGGCATGGGAGGTTTGGGCAAAACCACCTTGGCTAAGAAATTATATAATCATAGAAAAATTCATAACCATTTTGATTGTAGAGCTTGGGTTTATGTCTCTAAAGAGTCCAGAAGAAAAGATATTTTGCAAGGAATCCTCAAGGATGCAGATGTTCTCGGTAGAGAAGAAATCGACAGATTGGAAAAACTACGGGAGGAAGATTTGGTGAACTTGCTGCTCACTAACTTGGATGAGAAAAGGTATTTAGTGGTTCTTGACGATATTTGGAGCATGGAGGTTTGGGATAGCTTAGAATCTGCATTTCCCAAAGGGAAGATGGGAAGTAAAGTAATGCTCACGACTAGAAACACGGAAGTAGCTTTGTATGCAGGTGCAGGTAGCAAGCCTCATCAACTACGAGCATTGAGAGAAGATGAAAGTCTGAGATTGCTATGCAACAAAGCATTCCCTGGAACAAATAGCATTCCCCCAGAATTGGAAAATCTTGCAAAGGAAATTGTGGGAAAATGTGGTGGTTTGCCTTTGGCTGTGGTAGTGGTTGGAGGTTTACTATCAACGAAACTTAAATCGCCTGAGGAATGGACGCCAGTGATTCAAAATATCGGTTGGCACTTGCAAAGGCAAGGTAGAATAGCAGGCATTTTGGCCCTAAGCTACAATGTCTTGCCTTCTAACTTAAAATCATGCTTTCTCTACGTAGGTCTTTTCCCAGAGGCTACGAACATTCAGACAAAAAAATTGATTCGCCTATGGGTTGCAGAAGGCTTTTTACCACAGGAAGGTGAAGAAACAGCAGAAGGTGTTGCTGAGAAATGCTTAAACGAGCTGATAGGTAGGTGCATGATTCAAGTGGGATCAGTAAGTTCATTAGGCAGGGTCAAAACAATTCGCATCCATGATCTTCTCAGAGATCTTTCCGTCTCAAAAGGACGGGAGGAATACTTTCTCAAAATATATCCGGGCGGCGTGACGGGCTCATCAGCGTCTCAGGTAAATAGATCCAGGAGACATGCCATACATTCTTGCTGTGACCGTTATAACTTCTTGAAACACAATGCCCATCATTCACGCTCCCTCCTGTTCTTCAATAGAGAATATAATGCAGATATAGTGAGGAAAATCAGGTTTTATAGCCAGCAGTACAATATGACTTTTCTGCAAGAAAAGAAGTTGAATTTCATTTACAGCAAATTCAAGCTCCTCAGGGTTTTAGAGTTAGATGGCGTTCGATTAGTTAGCCTGCCACATACAATAGGGGACCTTATCCAATTAAGGTACCTAGGGTTGATGAAGACTAATCTAGAAGAAGAACTTCCACCTTCCATTGGAAACTTGCAGAACCTACAGACACTTGATTTAAGATACTGTTGTTTTCTTAAGAGGATACCCAATGTAATCTGGAAGTTGGGAAATTTGAGGCATTTGCTTCTGTATACCCCATTTGATTCTCCAGATAGCGGGCATCTAAGAATGGATACATTGACCAATTTACAAAGCCTGCCATACATAGAGGCTGGAAGCTGGATAGAAGATGGGAGTTTAGCCAAAATGAGCAATCTTAGGCAACTGGGGATATATGAGTTATCAGGGAAAATGGTGAGGTCAATTCTTTCTATTGCACAAGGATTACTTCACCTACAGTCACTTTCTCTATCACTTCAATCTGAAGAGGAGGAATTTCCAATCCTAATGCATCTCTCTCAGTGCACTCAGCTCCACAAGCTATCTTTGAATGGGAAGATCAAGAAGCTACCAGACCCACATGAATTCCCTCCAAACCTTATCAAACTAACTTTACATAACTCCCATCTACAGAAGGAGTCCATTGCCAAACTAGAGAGGTTGCCAAAACTTAAAATGCTTGTGTTAGGGAAAGGAGCATACAATTGGCCGGAATTGACCTTCTCTGCTGAAGGATTTTCACGATTGCAAATTCTACGGCTTAATCTTTTAAAAGAATTGGAGGAGTGGACTGTTAAGGAATGGGCAATGCCAAGACTTGAACGCATAGTTATTAATCGCTGTGAGAAGCTGAAGAAGATCCCAGAAGGACTGAAGGCAGTTACTTTTCTCAAGGAAATAAAGATTATAGGAATGCCAGTAGAATTTGAACACAGACTACGAACTAAAGACTTGCTAGAGTTCCAAAATACCCCTTCAATTGAATCAACTACAGACATTTTGGCAAATGTCGTGGCTTTCTCCTCCATTGAACGGCTTGCCTCAGTTTCTTGCTATGAGGTGGATCCAAGCACCGGCAAGTTTTCCGCATCTCTTAAGCACCCAGAGTCTTACTCCTTTGAATCCGTTGGCGAGAACTTCCAACGAGAAGTAACGGTTAAGAAAGATCTTATGATTCACCATTCAGGAATATGCTTTCCCATTCATGGCATGTTTCGTGATTTGACAACAATGATGTTGTTGAAGAACGGACAGAGTATTCTACCTGAAATGGTGAGTAGCAAAGTTGTGGCGGCAAATGAGGTTAACCAAGCTGCCGAAATGGCAAGTGAGAGTAAAAGGACCGCTGAAGCAGAAGGAGAAGACAAGGCCCATGTCAAATATACTGAGCTGCTGAATGAAGCCCAAGAAGGAAAAACCTGTATGGGCACGAGATTATCAATTGGGATAAAAGGGAATGATATTTGGGAGGGGACCACAGAATATTGGTTTCTTAACTGTCTCTGCCTCCCTTTGGTAATGCCTCTTGTCTCTGAGCATAATTCCGATAAGGTCCATGACTTCAAGCGGAGTGAGCCCCATGAGGTCGTCCACGACGACCGAGACCTTCATGGATTGAACTGGCTTTGA 3369 0.4256 MAEVAVSIVVEKLSELLLEQAAKAISELNGVRDDVEKLKIDLRWMQSFLRDADAKQEENQMIRMWISEIRDVAFEAEELIEIFVYKALCQSRWDRVFRSFHLYDMARRIDKIRSRIHDISEKRENYGVVGYKRDEGQGSTNERLRHWRQPSPYTEEEYVIELEDAMEFPLSQLLTLDKRRQVVSIVGMGGLGKTTLAKKLYNHRKIHNHFDCRAWVYVSKESRRKDILQGILKDADVLGREEIDRLEKLREEDLVNLLLTNLDEKRYLVVLDDIWSMEVWDSLESAFPKGKMGSKVMLTTRNTEVALYAGAGSKPHQLRALREDESLRLLCNKAFPGTNSIPPELENLAKEIVGKCGGLPLAVVVVGGLLSTKLKSPEEWTPVIQNIGWHLQRQGRIAGILALSYNVLPSNLKSCFLYVGLFPEATNIQTKKLIRLWVAEGFLPQEGEETAEGVAEKCLNELIGRCMIQVGSVSSLGRVKTIRIHDLLRDLSVSKGREEYFLKIYPGGVTGSSASQVNRSRRHAIHSCCDRYNFLKHNAHHSRSLLFFNREYNADIVRKIRFYSQQYNMTFLQEKKLNFIYSKFKLLRVLELDGVRLVSLPHTIGDLIQLRYLGLMKTNLEEELPPSIGNLQNLQTLDLRYCCFLKRIPNVIWKLGNLRHLLLYTPFDSPDSGHLRMDTLTNLQSLPYIEAGSWIEDGSLAKMSNLRQLGIYELSGKMVRSILSIAQGLLHLQSLSLSLQSEEEEFPILMHLSQCTQLHKLSLNGKIKKLPDPHEFPPNLIKLTLHNSHLQKESIAKLERLPKLKMLVLGKGAYNWPELTFSAEGFSRLQILRLNLLKELEEWTVKEWAMPRLERIVINRCEKLKKIPEGLKAVTFLKEIKIIGMPVEFEHRLRTKDLLEFQNTPSIESTTDILANVVAFSSIERLASVSCYEVDPSTGKFSASLKHPESYSFESVGENFQREVTVKKDLMIHHSGICFPIHGMFRDLTTMMLLKNGQSILPEMVSSKVVAANEVNQAAEMASESKRTAEAEGEDKAHVKYTELLNEAQEGKTCMGTRLSIGIKGNDIWEGTTEYWFLNCLCLPLVMPLVSEHNSDKVHDFKRSEPHEVVHDDRDLHGLNWL 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1821 1122 CDD RX-CC_like 2 121 IPR038005 -
Bisa01g1821 1122 PRINTS Disease resistance protein signature 629 645 - -
Bisa01g1821 1122 PRINTS Disease resistance protein signature 356 370 - -
Bisa01g1821 1122 PRINTS Disease resistance protein signature 182 197 - -
Bisa01g1821 1122 PRINTS Disease resistance protein signature 261 275 - -
Bisa01g1821 1122 Coils Coil 21 41 - -
Bisa01g1821 1122 Gene3D Ribonuclease Inhibitor 694 894 IPR032675 -
Bisa01g1821 1122 PANTHER DISEASE RESISTANCE PROTEIN RP 35 861 IPR044974 GO:0006952
Bisa01g1821 1122 Gene3D - 4 120 - -
Bisa01g1821 1122 Gene3D - 145 311 IPR027417 -
Bisa01g1821 1122 FunFam Probable disease resistance protein At5g66910 320 404 - -
Bisa01g1821 1122 FunFam Probable disease resistance protein At1g61300 142 314 - -
Bisa01g1821 1122 Pfam NB-ARC domain 176 392 IPR002182 GO:0043531
Bisa01g1821 1122 FunFam Probable disease resistance protein At1g63360 405 494 - -
Bisa01g1821 1122 Coils Coil 1012 1032 - -
Bisa01g1821 1122 Gene3D Ribonuclease Inhibitor 566 693 IPR032675 -
Bisa01g1821 1122 Gene3D - 405 495 IPR036388 -
Bisa01g1821 1122 Gene3D - 320 404 IPR042197 -
Bisa01g1821 1122 Pfam Rx N-terminal domain 5 93 IPR041118 -
Bisa01g1821 1122 SUPERFAMILY L domain-like 484 910 - -
Bisa01g1821 1122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 418 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1821 Bisa-ChrBisa01 31694292 31701265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1821 181 491 WRKY Transcription Factor Family AT5G45050 23.171 3.05e-09 59.7