Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1817 ATGGGCATGGCGGCGTTGCAGTTGCAGTTGCAGAAGCTGCATCTGAATAGAGGCGTTAAACCTAAAAGAATGGCGGGCTTATTCTCACTAGGCGGAGGAGGGAGAGGGAACAACCAAGTCCAACAGCCCACAACCACGGAATTCCCTACGGCGGAGACCTTTTATTGGTACAAGAACGATGATGCGGCGTCGTACAGGGGACTGGAGCTATGGAACCAGGAAGAGGAACAAGATCTATACGGGTCAGGGGGTATGGTAGGGGTGGGGGTAGGGCCGAGTGGGAGGTTCGATGATGAGTCGTCGTCGAGGTCAGGGATGATGAGAATGGTGGGATCAGGAGGAAGAGGAGGAACAAGCTGCCAGGACTGCGGGAACCAGGCCAAGAAGGATTGCCCTCACATGCGGTGCAGGACTTGCTGCAAAAGCAGAGGCTTCCATTGCCAAACCCACATCAAGAGCACTTGGGTTCCCGCGCCTAAGCGTCGCGAACGACAGCAACAGCTCGCCGTTTTGCACCAGCAGCAGCAGCAGCAACAACTCCAACTTCCCGGAGAGACTCATTCCAAGAGGCAGAGGGATACAGGGTTAGAGCATGAAGAATTTCCTGCAGTGATAAGCTCTCCTGCGGAGTTCAGGTGCATGCGGGTGAGTTCAGTGGACGACGCTGAGGAACAATACGCGTATCAAACGGCAATAAACGTAGGAGGACATTTGTTCAGAGGGATTCTGTATGACCAGGGTCCCGACTATAATTACATGGGTGGAGATGAGAGTGGCTCTGCCGCTGTCGGCGGAGTTCAGCCGTTAAACCTCATTGCCGCTTCCGGCAGCGGCGCGTCTGTTTTACCCACAAGCGCAGCGAGTGGTGGTGCCATGGTCTCGTGTAGTGAGGCACTTGTGGATCCTTCTTCTTTGTATCCAGCTCCACTTAGCACCTTCATGGCTGGAGGCAGCGGTACGCAATTCTTCCCTCACCCAAGATCTTCATAA 990 0.5455 MGMAALQLQLQKLHLNRGVKPKRMAGLFSLGGGGRGNNQVQQPTTTEFPTAETFYWYKNDDAASYRGLELWNQEEEQDLYGSGGMVGVGVGPSGRFDDESSSRSGMMRMVGSGGRGGTSCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHIKSTWVPAPKRRERQQQLAVLHQQQQQQQLQLPGETHSKRQRDTGLEHEEFPAVISSPAEFRCMRVSSVDDAEEQYAYQTAINVGGHLFRGILYDQGPDYNYMGGDESGSAAVGGVQPLNLIAASGSGASVLPTSAASGGAMVSCSEALVDPSSLYPAPLSTFMAGGSGTQFFPHPRSS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1817 329 MobiDBLite consensus disorder prediction 168 185 - -
Bisa01g1817 329 MobiDBLite consensus disorder prediction 160 196 - -
Bisa01g1817 329 NCBIfam putative zinc finger domain, LRP1 type 119 161 IPR006510 -
Bisa01g1817 329 Pfam Domain of unknown function (DUF702) 117 249 - -
Bisa01g1817 329 NCBIfam LRP1 C-terminal domain 201 248 IPR006511 -
Bisa01g1817 329 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 24 311 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1817 Bisa-ChrBisa01 31636860 31638765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1817 24 316 C2H2 Transcription Factor Family AT5G66350 46.847 1.97e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bisa01g1817 DUF702 4.4e-59 No_clan