Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1800 ATGGTGAAGTCATCATGCTGCCAGAATAAAGGGTTGAAGAAAGGGCCATGGAGTCCGGAGGAAGACCAGAAGCTCATTGCTTATGTTAAAGAACACGGCCACGGAAACTGGCGCTGTTTGCCTGGCAAAGCAGCTCACTTGCCTGGAAGAACAGACAACGAGATAAAGAACTATTGGAACACCCACCTCAAGAAAAGGCTTATGAAGATGGGGATAGATCCCATTACTCACAAGCCTCAAACCGAATCTCTGGGCCATTCCCTCTCCCACCATGACTCAGCCTATCTCCGACACATGGCTCAGTGGGAGTCTGCTCGGCTTGAAGCTGAAGCTAGACTGCTCAGAGAGTCTAACAGCCACAGTCATAGCCATAACCACCCTGGACCCTCCTCACAACCACCTCGGCTCATCGTAAGCAAGATCCCACGTCGACCCTCACTTCCTCCATGCCTCGACATCCTCAAAGCTTCGCAACTAACCTCATGGCCTTCGTCCTCATCATCGGATGACTCTCTTCTTCCACCAACTCAACACAACAACACTACTAGGTTGTATAACATGTATGCCATCATGTTAACCAATGATGATCGTGAACTTGAGTCTCCCGCATCCACACTCTGCTTCCCTGAAGCCAATAAGAATATATGTATTAGTAACGTTGAAACCGGTAATGATAAGGGTTATGGTCTCAAACAGAACCCTTTGTTGTTACAGGACGACGACATTATGGTGGCTGTGGAAGCATTCACATCGTCAGCAGCGACAGTACCTGAGAATAATAATAATAATATTGCAGGGCTCTCAAACATTAATGTTATTGCCCATACGGAAGGTGATATAAATCACATGTCATCTTTCGATCCCTGCGATGAGAAATTATTAGCTGGGGTAAGCGAAGACGAAGGAAGCAAAAGTATGAATTACTGGAACAGCCTACTGGATTTGTATAGCGATTCCCTCGCTGGGTCGCCTGTCTTCTGA 981 0.4699 MVKSSCCQNKGLKKGPWSPEEDQKLIAYVKEHGHGNWRCLPGKAAHLPGRTDNEIKNYWNTHLKKRLMKMGIDPITHKPQTESLGHSLSHHDSAYLRHMAQWESARLEAEARLLRESNSHSHSHNHPGPSSQPPRLIVSKIPRRPSLPPCLDILKASQLTSWPSSSSSDDSLLPPTQHNNTTRLYNMYAIMLTNDDRELESPASTLCFPEANKNICISNVETGNDKGYGLKQNPLLLQDDDIMVAVEAFTSSAATVPENNNNNIAGLSNINVIAHTEGDINHMSSFDPCDEKLLAGVSEDEGSKSMNYWNSLLDLYSDSLAGSPVF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1800 326 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Bisa01g1800 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 67 IPR017930 -
Bisa01g1800 326 MobiDBLite consensus disorder prediction 116 141 - -
Bisa01g1800 326 SMART sant 13 65 IPR001005 -
Bisa01g1800 326 Gene3D - 11 69 - -
Bisa01g1800 326 Pfam Myb-like DNA-binding domain 14 63 IPR001005 -
Bisa01g1800 326 SUPERFAMILY Homeodomain-like 8 73 IPR009057 -
Bisa01g1800 326 CDD SANT 16 63 IPR001005 -
Bisa01g1800 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 44 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1800 Bisa-ChrBisa01 31110395 31111928 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1800 1 135 MYB Transcription Factor Family AT3G01140 47.090 1.54e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa01g1800 Myb_DNA-binding 5.9e-14 CL0123