Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1797 ATGGGTAGGTCACCATGCAGCCAGAAAGGGTTGAAGAAAGGGGCATGGAGTCCGGAGGAAGACCAGAAGCTCATTGCTTACGTTAAAGGACATGGCCACAGAAACTGGCGTAGTTTGCCTGCCAAAGCAGCTACACGCCATCTTTTGTTCGTAGGATGGTCAATCATAGCAGCTCACTTGCCTGGAAGAACAGACAACGAGATAAAGAACCATTGGAACATCCACCTCAAGAAACGGCTTATGAAGATGGGGATAGATCCCATCACTCACAAGCCTCAAACCGAATCTCTGGGCCATTCCCACTCCCACCATGACTCAGCCTATCTCCAACACATGGCTCAGTGGGAGTCTGCTCGGCTTGAAGCTGAAGCTAGAATGCTCAGAGAGTCTAACAGCCACAATCATAGCCATAACCACCTTGGACCCTCCTCACAAGCACAACCACCTCGGCTCATCGTAAGCAAGATCCCACGTCGACCCCCACTTCCTCCATGCCTCGACATCCTCAGAGCTTCGCAACAAACCTCATGGCCTTCGTCCTCGTCATCGGATCACTCTCTTCTTCCACCAACTCAACACAACAACAACACTAGATTGTGTAACATGTATGCCATCATGCTAACCAATGATGATCGTGGACTTGAGTCTCCCGCATCCACACTCTGCTTCCCTGAAGCCAATAAAAATAACTGTATGAGTAACGTTGAAACCGGTAATGATAAGGGTTGTGGTCTTAAACAGAACCCTTTGTTGTTACAGGATGACAACATTATGGTGACTGTGGAAGCATTCATATCGTCAGCAGCAACAGTACCTGAGAATAATAATAATAATATTTTAGGGCTCTTAAACAATGTTATTTCCCCTATGGAAGGTAATACAAATGACATGTCATCTTTCGATCCCTTCAATGAGAAATTATTAACTGGGGAAAGCGGAGACGAAGGAAGCGAAAGATCAGCAGCCACCTGCACCTCACTGATAACCGTCTCTCGGTCTCTGAAACCTCGCTATGCCTATGCATGA 1026 0.4708 MGRSPCSQKGLKKGAWSPEEDQKLIAYVKGHGHRNWRSLPAKAATRHLLFVGWSIIAAHLPGRTDNEIKNHWNIHLKKRLMKMGIDPITHKPQTESLGHSHSHHDSAYLQHMAQWESARLEAEARMLRESNSHNHSHNHLGPSSQAQPPRLIVSKIPRRPPLPPCLDILRASQQTSWPSSSSSDHSLLPPTQHNNNTRLCNMYAIMLTNDDRGLESPASTLCFPEANKNNCMSNVETGNDKGCGLKQNPLLLQDDNIMVTVEAFISSAATVPENNNNNILGLLNNVISPMEGNTNDMSSFDPFNEKLLTGESGDEGSERSAATCTSLITVSRSLKPRYAYA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1797 341 MobiDBLite consensus disorder prediction 130 149 - -
Bisa01g1797 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 80 IPR017930 -
Bisa01g1797 341 Pfam Myb-like DNA-binding domain 13 73 IPR001005 -
Bisa01g1797 341 SUPERFAMILY Homeodomain-like 13 77 IPR009057 -
Bisa01g1797 341 Gene3D - 10 82 - -
Bisa01g1797 341 ProSiteProfiles Myb-like domain profile. 8 76 IPR001005 -
Bisa01g1797 341 MobiDBLite consensus disorder prediction 173 193 - -
Bisa01g1797 341 SMART sant 12 78 IPR001005 -
Bisa01g1797 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 53 190 - -
Bisa01g1797 341 CDD SANT 15 76 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1797 Bisa-ChrBisa01 30989125 30994910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1797 1 147 MYB Transcription Factor Family AT3G01140 50.000 2.78e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa01g1797 Myb_DNA-binding 1.8e-13 CL0123