Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1791 ATGGTTAAGTCACAATGCTGCCAGAATAAAGGGTTGAAGAAAGGGTCATGGAGTCCGGAGGAAGACCAGAAGCTCATTGCTTACGTTAAAAAACATGGCCACGGAAACTGGCGTTGTTTGCCTGCCAAAGCAGCTAATGTAATAGTCGATGTGTGTACGTACAGATGGTCAATAATAGCAGCTCACGTGCCTGGAAGAACAGACAACGAGATAAAGAACTATTGGAACACCCGCCTCAAGAAGAGGCTTATGAAGATGGGGATAGATCCCATCACTCACAAGCCTCAAACCGAATCTCTGGGCCACTCCCGCTCCCACCATGACTCAGCCTATCTCCGACACATGGCTCAGTGGGAGTCTGCTCGGCTTGAAGCTGAAGCTAGACTGCTCAGAGAATCTAACAGCCACAATCATAGTCATAACCAACTTGGACCCTCCTCACAAGCACAACCACCTCGGCTCATCGTAAGCAAGATCCCACGTCGACCCTCTCTTCCTCGATGCTTAGACATCCTCAAAGCTTCGCACCAAAGCTCATGGCCTTCGTCCTCGTCATCGGATCACTCTGTTCTTCCACCAACTCAACACAACAACAACACCAGATCATTGTATAACATGTACGCCATCATGCTAACCAATGATGATCATGGACTTGAGTCTCCCGCATCCACACTCTGCTTCTCTGAAGCCAATAAAAATAACTCTATTAATGACGTTGAAACCGGTAATGATAAGGGTTATGTTCTCAAACAGAACCCTTTGTTGTTACAGGACAACGACATTTTGGTGGCTGTGAAAGCATTCACATCGTCAGCGGCAACAGTACCTGAGAATAATAATATTGCAGGGCTCTCAAACAATGTTTTTTCCCATATGGAAAGTGATCATATAAATGACATGTCATCTTTCGATCCCTGCGATGAGAAATTATTGACTGGGGAAAGCGGAGACGAAGGAAGCGAAAGTTTGAATTACTGGAACAGCTTACTGGATGTTTACAGCGGTTCCCTCGCCGGGTCCCCTGTCTTCTGA 1032 0.4651 MVKSQCCQNKGLKKGSWSPEEDQKLIAYVKKHGHGNWRCLPAKAANVIVDVCTYRWSIIAAHVPGRTDNEIKNYWNTRLKKRLMKMGIDPITHKPQTESLGHSRSHHDSAYLRHMAQWESARLEAEARLLRESNSHNHSHNQLGPSSQAQPPRLIVSKIPRRPSLPRCLDILKASHQSSWPSSSSSDHSVLPPTQHNNNTRSLYNMYAIMLTNDDHGLESPASTLCFSEANKNNSINDVETGNDKGYVLKQNPLLLQDNDILVAVKAFTSSAATVPENNNIAGLSNNVFSHMESDHINDMSSFDPCDEKLLTGESGDEGSESLNYWNSLLDVYSGSLAGSPVF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1791 343 Gene3D - 11 85 - -
Bisa01g1791 343 SMART sant 13 81 IPR001005 -
Bisa01g1791 343 MobiDBLite consensus disorder prediction 134 153 - -
Bisa01g1791 343 MobiDBLite consensus disorder prediction 176 197 - -
Bisa01g1791 343 Pfam Myb-like DNA-binding domain 14 77 IPR001005 -
Bisa01g1791 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 55 225 - -
Bisa01g1791 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 83 IPR017930 -
Bisa01g1791 343 MobiDBLite consensus disorder prediction 136 153 - -
Bisa01g1791 343 CDD SANT 16 79 IPR001005 -
Bisa01g1791 343 ProSiteProfiles Myb-like domain profile. 9 79 IPR001005 -
Bisa01g1791 343 SUPERFAMILY Homeodomain-like 11 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1791 Bisa-ChrBisa01 30809175 30810741 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1791 1 148 MYB Transcription Factor Family AT5G15310 50.811 4.70e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa01g1791 Myb_DNA-binding 1.8e-14 CL0123