Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1788 ATGTCATCAGCCATGTGCAGAGTTAATCCAGATCTACGTAACATACAGTTTAAGGAAGTCCAGAATAATGCAAGTCCCTATGCAAAAAGGAAAATGGCTCTCATTGGGTTGCTCTTGCTGGGATTTCTCTCCATGTTGTTCTCCTCTGCTCATGGCTATGGCGGAGGGTGGATCAATGCCCATGCCACCTTCTATGGAGGTGGAGATGCATCAGGCACAATGGGTGGGGCTTGTGGGTACGGGAATCTGTACAGCCAGGGTTATGGAACGAACACGGCTGCTCTGAGCACGGCTATGTTCAACAATGGCCTCGGCTGTGGGTCGTGCTATGAGGTAAGGTGCGTGAATGATAGGAGGTGGTGCCTCCCTGGGTCCATAGTGGTCACAGCCACCAACTTCTGCCCTCCAAACAACGCCTTGCCCAACAATGCAGGAGGATGGTGTAACCCTCCTCTCCACCACTTTGATCTCGCTCAGCCTGTCTTCCTTCGCATTGCCGAATACAAAGCTGGAATCGTACCCGTCTCTTACAGAAGGGTACCCTGCAGGAGAAGGGGAGGCATAAGGTTCACCGTCAATGGCCACTCCTACTTCAACCTGGTCCTCATCACAAACGTAGGTGGTGCTGGAGATGTGCATGGTGTGGCAATCAAAGGGTCCAGAACTAGGTGGACGGCAATGTCAAGAAACTGGGGCCAGAACTGGCAGAGCAACAACTACCTCAATGGCCAAAGCCTCTCCTTCAAGGTCACCACCAGTGATGGCCGTTCAGTGGTCTCCTACAATGTGGCCCCACCTAACTGGTCCTTTGGCCAAACCTTCACTGGTGCCCAATTCCGCTAG 843 0.5267 MSSAMCRVNPDLRNIQFKEVQNNASPYAKRKMALIGLLLLGFLSMLFSSAHGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTAMFNNGLGCGSCYEVRCVNDRRWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPLHHFDLAQPVFLRIAEYKAGIVPVSYRRVPCRRRGGIRFTVNGHSYFNLVLITNVGGAGDVHGVAIKGSRTRWTAMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRSVVSYNVAPPNWSFGQTFTGAQFR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1788 280 Gene3D - 43 183 IPR036908 -
Bisa01g1788 280 FunFam Expansin 47 183 - -
Bisa01g1788 280 SUPERFAMILY Barwin-like endoglucanases 42 205 IPR036908 -
Bisa01g1788 280 FunFam Expansin 187 279 - -
Bisa01g1788 280 PRINTS Expansin signature 87 101 IPR002963 GO:0009664
Bisa01g1788 280 PRINTS Expansin signature 262 278 IPR002963 GO:0009664
Bisa01g1788 280 PRINTS Expansin signature 145 162 IPR002963 GO:0009664
Bisa01g1788 280 PRINTS Expansin signature 186 198 IPR002963 GO:0009664
Bisa01g1788 280 PRINTS Expansin signature 126 136 IPR002963 GO:0009664
Bisa01g1788 280 PRINTS Expansin signature 162 175 IPR002963 GO:0009664
Bisa01g1788 280 PRINTS Expansin signature 114 125 IPR002963 GO:0009664
Bisa01g1788 280 PRINTS Expansin signature 233 254 IPR002963 GO:0009664
Bisa01g1788 280 PRINTS Expansin signature 198 219 IPR002963 GO:0009664
Bisa01g1788 280 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 75 187 IPR007112 -
Bisa01g1788 280 Pfam Lytic transglycolase 92 177 IPR009009 -
Bisa01g1788 280 SUPERFAMILY PHL pollen allergen 184 276 IPR036749 -
Bisa01g1788 280 PRINTS Expansin/Lol pI family signature 170 186 IPR007118 GO:0005576
Bisa01g1788 280 PRINTS Expansin/Lol pI family signature 74 92 IPR007118 GO:0005576
Bisa01g1788 280 PRINTS Expansin/Lol pI family signature 96 114 IPR007118 GO:0005576
Bisa01g1788 280 PRINTS Expansin/Lol pI family signature 224 238 IPR007118 GO:0005576
Bisa01g1788 280 PRINTS Expansin/Lol pI family signature 56 71 IPR007118 GO:0005576
Bisa01g1788 280 PRINTS Expansin/Lol pI family signature 262 276 IPR007118 GO:0005576
Bisa01g1788 280 CDD DPBB_EXPA_N 56 182 - -
Bisa01g1788 280 PANTHER EXPANSIN-A15 39 279 IPR002963 GO:0009664
Bisa01g1788 280 SMART dpbb_1 92 177 IPR007112 -
Bisa01g1788 280 Gene3D - 187 279 IPR036749 -
Bisa01g1788 280 Pfam Expansin C-terminal domain 188 265 IPR007117 -
Bisa01g1788 280 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 197 276 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1788 Bisa-ChrBisa01 30702091 30706244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1788 31 280 Expansin Gene Family AT2G03090 80.800 1.67e-155 432