Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1781 ATGGCAACATGCCCACATGCATCACAGAACGCGGCTTCCAGATCTTTCCACAATCTTCTTGCGTATCAGTGGTCGCATGCCGTCTCTGTGTTTCCCACCTTAAATCCCTCTTCGTCCTTTTCCTTCCTCTTCATTACCCCCAATACTTCTTCCCCACTCTGCAATCTGTATTCCATTATTCTTCTTTCTTTCTATTTTCTACTGCAATCCATGGCTTCTGAACCCCAAGTCTCTGAGATTTCGTCTCTGTTCGAAAGGTTGGTGAGATACAGAGAGCTGTCTCTGTTCTTGCCTTTCGTCTTCGGCTTTGTTAACGCATCTCCTACAAGAAACAATCAAGACCCACAACAGGAAACTGAGAATGCAGAAAATACCCATGGGGAAAGAGTCATCTTTATCAACCCCTTTACGCAGGGCATGGTGATGATTGATGGTACTTCGAGCCTCGAGACTCTGTTTCGTGAAATGGGTATGAAAGATGGGCAACAGCCGGCGTCCAAGGAATCCATAGACGCGATGCCGAGTGTGACAATCGGAGAAGGTGAAGATGGGGAGTGTGCAATTTGTCTGGAGCAATGGGAGATTGGTGGGGTTGCGAAAGAGATGCCTTGTAAGCATAAATTTCATCGAAGTTGTATAGAGAAGTGGTTGGGAATTCATGGGTCTTGCCCTGTTTGTAGGTACCAGATGCCTGTAGATGAGAAAGAAGTGGGGAAGAGAGATGAAGAAAATGGAGAAGGAGGGGAAGAGAGAAGGAGGGTTGGCAGAGAAGTTTGGGTTAATTTCCTTTTCAGAGGTGGGGTTCCAGACCAAGCTCCTTCTGGTGATTCCACTGATTCTTCATCCAGTTCAAGAGGTGATTCAGAGGCAGAGAGTTAG 879 0.4664 MATCPHASQNAASRSFHNLLAYQWSHAVSVFPTLNPSSSFSFLFITPNTSSPLCNLYSIILLSFYFLLQSMASEPQVSEISSLFERLVRYRELSLFLPFVFGFVNASPTRNNQDPQQETENAENTHGERVIFINPFTQGMVMIDGTSSLETLFREMGMKDGQQPASKESIDAMPSVTIGEGEDGECAICLEQWEIGGVAKEMPCKHKFHRSCIEKWLGIHGSCPVCRYQMPVDEKEVGKRDEENGEGGEERRRVGREVWVNFLFRGGVPDQAPSGDSTDSSSSSRGDSEAES 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1781 292 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 114 231 - -
Bisa01g1781 292 SMART ring_2 186 226 IPR001841 -
Bisa01g1781 292 MobiDBLite consensus disorder prediction 265 292 - -
Bisa01g1781 292 FunFam E3 ubiquitin-protein ligase RNF181 153 233 - -
Bisa01g1781 292 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 233 IPR013083 -
Bisa01g1781 292 Pfam Ring finger domain 185 227 IPR001841 -
Bisa01g1781 292 SUPERFAMILY RING/U-box 178 232 - -
Bisa01g1781 292 ProSiteProfiles Zinc finger RING-type profile. 186 227 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1781 Bisa-ChrBisa01 30647821 30648699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1781 71 267 C3H Transcription Factor Family AT1G26800 46.535 4.98e-58 183