Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1772 ATGAGCGATCATTTGGTTTTGTATGTTGACCGTCTAGTACGGCCTGCGGCCGATGAGCCGGTGACTCAACCGGCTGAGGTCCCGTCTGAGCCGGCTCCGTCTTCAGATGCTGCGGGGCCATCTGGTTCTGCACCGCCGTTAGATGATGACGCTAGGTCTGAGCATGATGAAAATGAGCCTCTGATCCAGATGGCCGAGTGTCGCATTTGTCAAGAGGAGGACAGCGTCAAGAATTTGGAGACTCCTTGTGCATGTAGCGGTAGTCTTAAGTTTGCTCACAGAAAGTGTGTTCAACATTGGTGCGATGAGAAAGGAGACATAATTTGTGAGATATGCCATCAGCCTTACCAGCCCGGCTATACTGCCCCACCACCGCGCCCTCATCCTGATGAAACTACCATCGATATAGGTGGAGGCTGGACAATCTCTGGCACGCCTTTGGACTTGCGTGACCCTCGACTCTTGGCAATTGCCGAGGCAGAACGCCAATTCTTGGAAGCTGAATATGATGAGTATGCCGCTTCTAATGCCAGTGGAGCTGCGTTTTGTCGCTCAGCTGCTCTAATTTTAATGGCCCTTCTACTCTTGCGGCATGCACTCTCCGTTACAGATTCTGATACCGATGATGATCCGTCTACTTTTTTCTCTCTTTTCTTACTCCGAGCAGCTGGATTTCTCTTACCTTGCTATATCATGGCTTGGGCGATCAGTATTTTGCAACGTCGGCGACAAAGACAAGAGGCGGCAGCATTGGCAGCGACCCAAGTTGCTTTTGTTTTACAGTCTGGGCAGCGTAGGGGTCTGCAATTCGCTATAGCACCAGGACCCACGGCCACGGTGAATTCACCTCAGGAGCATGTGTAG 864 0.515 MSDHLVLYVDRLVRPAADEPVTQPAEVPSEPAPSSDAAGPSGSAPPLDDDARSEHDENEPLIQMAECRICQEEDSVKNLETPCACSGSLKFAHRKCVQHWCDEKGDIICEICHQPYQPGYTAPPPRPHPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDEYAASNASGAAFCRSAALILMALLLLRHALSVTDSDTDDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAIAPGPTATVNSPQEHV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1772 287 SUPERFAMILY RING/U-box 65 117 - -
Bisa01g1772 287 Pfam Protein of unknown function (DUF3675) 118 236 IPR022143 -
Bisa01g1772 287 SMART ringv_2 66 113 IPR011016 GO:0008270
Bisa01g1772 287 Coils Coil 155 175 - -
Bisa01g1772 287 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 246 IPR033275 -
Bisa01g1772 287 ProSiteProfiles Zinc finger RING-CH-type profile. 59 119 IPR011016 GO:0008270
Bisa01g1772 287 FunFam RING/FYVE/PHD zinc finger protein 55 123 - -
Bisa01g1772 287 CDD RING_CH-C4HC3_MARCH 67 113 - -
Bisa01g1772 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 122 IPR013083 -
Bisa01g1772 287 MobiDBLite consensus disorder prediction 17 56 - -
Bisa01g1772 287 Pfam RING-variant domain 67 112 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1772 Bisa-ChrBisa01 30449218 30452138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1772 66 113 C3H Transcription Factor Family AT2G37950 41.176 3.07e-06 45.4