Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1770 ATGGACTTGAACCCCATCGCCACCCCTACACACTCCTTAGATGCCCATACTCCAACTTCGCAGCCACCGCCACCACCCACCCTTCCCCCCAGCGCTTCCAAGTCTCTTTCTTTCACCAACGGTGGTTCCCTCAAGCGCCACCACCCGCCTCCGCAGCAACCGCCACCGCCCACTGTGGTTTCCTACAAGGAGTGTCTCAAGAACCACGCCGCCTCCATAGGCGGCCACGCGCTTGATGGCTGCGGTGAGTTCATGCCCTCCACCACCGCCGACCCTCGGGATCCTCGCTCCCTGAAATGCGCCGCCTGTGGCTGCCACCGCAACTTCCACCGCCGTGATCCACAAGAATTTCACTCCAGCCCCAACCTCAGCTGCTTCTACCCACCGGCACCACCGCCTCTAGCTCACCGTGGGTTGAGCCTGAGCACCAGCCCGAGTCTGAGCCCAAGCCTAAGCCCGAGCAGCGCCAGCCCGAGTCCATTATCAAGCCCATCATCACCACCACCGGTCTCGCATTTCCCACCTTCCTACCACACTTCGGCGCCACACATGCTCTTAGCGCTCGGCAACGCCTATTCTGGACCGTCCGATGAGCAGCAGCAGCATCGGAGTTTCCTCAATTCTACGCCGAAGACGGAGAAGGAGAACCCAAGTGGGAAAAAGAGGTTTAGGACTAAATTCAGCCAAGAGCAGAAGGAGAAGATGCATCTGTTCTCTGAGAAATTGGGTTGGAGAATGCAAAAAGGGGATGATAGAATGGTTCAAGATTTCTGCAAAGAGGTCGGGGTTTCTAGAGGAGTCTTCAAGGTTTGGATGCACAACAATAAGAGCACTTTCAGGAAAAGATCAGAAACGGGCAATCTCCAAACTGAGAAATTAATCAACGAAGGCAACGACAATTGTGGTAGTAGAGGTGGGTCTGATAGCGATATGAACAATGGCGGTATTAATCTTCATGCTTCTGTGAATGGGTCTTCTTAA 981 0.5484 MDLNPIATPTHSLDAHTPTSQPPPPPTLPPSASKSLSFTNGGSLKRHHPPPQQPPPPTVVSYKECLKNHAASIGGHALDGCGEFMPSTTADPRDPRSLKCAACGCHRNFHRRDPQEFHSSPNLSCFYPPAPPPLAHRGLSLSTSPSLSPSLSPSSASPSPLSSPSSPPPVSHFPPSYHTSAPHMLLALGNAYSGPSDEQQQHRSFLNSTPKTEKENPSGKKRFRTKFSQEQKEKMHLFSEKLGWRMQKGDDRMVQDFCKEVGVSRGVFKVWMHNNKSTFRKRSETGNLQTEKLINEGNDNCGSRGGSDSDMNNGGINLHASVNGSS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1770 326 MobiDBLite consensus disorder prediction 160 175 - -
Bisa01g1770 326 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 62 113 IPR006456 -
Bisa01g1770 326 MobiDBLite consensus disorder prediction 189 225 - -
Bisa01g1770 326 MobiDBLite consensus disorder prediction 139 159 - -
Bisa01g1770 326 FunFam Zinc-finger homeodomain protein 2 207 281 - -
Bisa01g1770 326 SUPERFAMILY Homeodomain-like 207 281 IPR009057 -
Bisa01g1770 326 Gene3D - 206 282 - -
Bisa01g1770 326 MobiDBLite consensus disorder prediction 294 326 - -
Bisa01g1770 326 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 46 278 - -
Bisa01g1770 326 Pfam ZF-HD protein dimerisation region 60 114 IPR006456 -
Bisa01g1770 326 MobiDBLite consensus disorder prediction 136 177 - -
Bisa01g1770 326 MobiDBLite consensus disorder prediction 193 213 - -
Bisa01g1770 326 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 113 IPR006456 -
Bisa01g1770 326 NCBIfam homeobox domain, ZF-HD class 220 276 IPR006455 -
Bisa01g1770 326 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1770 Bisa-ChrBisa01 30427599 30428579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1770 60 279 ZF-HD Transcription Factor Family AT1G69600 48.649 6.04e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa01g1770 ZF-HD_dimer 7e-29 No_clan