Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1740 ATGTCTAGCAGAAGATCTCGGTCCAGACAAGCGGGTGTTGATTCCGCTGAGATCACTGATGCTCAGATCACCGATCTCGTCTCCAAGTTACGCCGACTTATTCCCGAGCTCCAAGCCATACGCTCCCACAAGGTTTCAGCAGCTAAAGTGTTGCAGGAGACTTGCAATTACATAAAGAACTTGCACAGAGAAGTTGATGATCTGAGTGACCGATTATCCGAGCTTTTGGCCACCACCGACTCCGATAGTGCCCAGGCAGCCATTATTAGGAGCTTACTTATGTAA 285 0.4877 MSSRRSRSRQAGVDSAEITDAQITDLVSKLRRLIPELQAIRSHKVSAAKVLQETCNYIKNLHREVDDLSDRLSELLATTDSDSAQAAIIRSLLM 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1740 94 CDD bHLH_AtPRE_like 13 78 - -
Bisa01g1740 94 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 22 79 IPR036638 GO:0046983
Bisa01g1740 94 FunFam Transcription factor ILI6 7 90 - -
Bisa01g1740 94 PANTHER TRANSCRIPTION FACTOR PRE 1 94 IPR044293 GO:0006355|GO:0040008|GO:0046983
Bisa01g1740 94 Pfam Helix-loop-helix DNA-binding domain 22 61 IPR011598 GO:0046983
Bisa01g1740 94 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 61 IPR011598 GO:0046983
Bisa01g1740 94 Gene3D - 21 90 IPR036638 GO:0046983
Bisa01g1740 94 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1740 Bisa-ChrBisa01 29957985 29958548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1740 1 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 67.368 1.36e-34 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g1740 HLH 1.4e-05 No_clan