Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1737 ATGGATGCAGGGTATGGAAACTGGACACCCTTACAGGTTCCAACTAATAAAGTCATATGGAGTGGAGTTGGCAGTGCGGGCAGAGAGAGGAACAGTGGGATGTATCATGCATGGATGGAGATATGCATAAAAAATAGGGAAAAGGACAAAGAAGAGAGAGCAGATTTGTGGGAGGTCAATACAAGCAATGAAATGGCTTTCTTTCCAGCAAATTTCATGTTGCAAAACCCTCACCAGGAAGACCATCATGAGCCTCCACCTTCTCTTAACTCAATTCTACCTCAAGATTTTCACGGGGGAGCATCGTTTCTAGGGAAGAGATCTATGACATTTTCAGGGCTTGAACTTGGTGGTGAAGAAGCAAACAATGGTGAGGAAGACCTGTCTGATGATGGATCTCAGGCAGGAGAGAAGAAGAGGAGGCTCAACATGGAACAAGTGAAGACTCTGGAGAAGAGCTTTGAGCTGGGAAACAAGCTTGAACCTGAGAGAAAAATGCAGCTTGCTAGGGCTCTTGGGCTGCAGCCCAGGCAGATTGCTATATGGTTCCAGAACAGAAGAGCTAGGTGGAAGACTAAGCAGTTGGAGAAAGACCACGATCTCCTCAAAAGACAATACGAAGCAGTAAAAGCAGATAATGATGCCCTTCAAGCCCATAACCAAAAACTTCAGGCAGAGATAATGGCACTGAAAAGCAGAGAAGTGCAAACAGAATCAATCAACCTCAATAAGGAAACAGAGGGATCATGCAGCAACAGAAGTGAGAATAGCTCAGACATCAAGTTGGATATCTCAAGAACACCTGCCATAGACAGTCCTCTATCCACCCATCAAATTACAAGCAGACCCCTCTTCCCACCATCTTCTTCTGCGAGGCCTTCTTCAGGATCAGTGGCTCAGTTTTTCCAAACATCTTCAAGACCAGACCTTCAATGCCAGAAGATTGATCATATGGTGAAAGATGAGAGCTTGAGCAACATGTTCTGCGGGATTGATGATCAGACAGGGTTCTGGCCTTGGTTGGAGCAGCAACATTTCAATTGA 1044 0.4531 MDAGYGNWTPLQVPTNKVIWSGVGSAGRERNSGMYHAWMEICIKNREKDKEERADLWEVNTSNEMAFFPANFMLQNPHQEDHHEPPPSLNSILPQDFHGGASFLGKRSMTFSGLELGGEEANNGEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDHDLLKRQYEAVKADNDALQAHNQKLQAEIMALKSREVQTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHQITSRPLFPPSSSARPSSGSVAQFFQTSSRPDLQCQKIDHMVKDESLSNMFCGIDDQTGFWPWLEQQHFN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1737 347 Coils Coil 192 233 - -
Bisa01g1737 347 PRINTS Lambda-repressor HTH signature 173 189 IPR000047 GO:0003677
Bisa01g1737 347 PRINTS Lambda-repressor HTH signature 164 173 IPR000047 GO:0003677
Bisa01g1737 347 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 115 282 IPR045224 GO:0003700
Bisa01g1737 347 MobiDBLite consensus disorder prediction 239 303 - -
Bisa01g1737 347 SUPERFAMILY Homeodomain-like 130 195 IPR009057 -
Bisa01g1737 347 ProSiteProfiles 'Homeobox' domain profile. 133 193 IPR001356 GO:0003677
Bisa01g1737 347 ProSitePatterns 'Homeobox' domain signature. 168 191 IPR017970 GO:0000981|GO:0006355
Bisa01g1737 347 Gene3D - 130 200 - -
Bisa01g1737 347 CDD homeodomain 138 194 IPR001356 GO:0003677
Bisa01g1737 347 MobiDBLite consensus disorder prediction 116 142 - -
Bisa01g1737 347 FunFam Homeobox-leucine zipper protein ATHB-13 130 197 - -
Bisa01g1737 347 Pfam Homeobox associated leucine zipper 193 233 IPR003106 GO:0006355|GO:0043565
Bisa01g1737 347 SMART HOX_1 136 197 IPR001356 GO:0003677
Bisa01g1737 347 Pfam Homeodomain 138 191 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1737 Bisa-ChrBisa01 29932551 29938212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1737 59 347 Homeobox Transcription Factor Family AT1G69780 63.245 2.28e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa01g1737 Homeodomain 1.9e-15 CL0123