Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1736 ATGAAGAAGCAGCAGCAGCAGCAGCTAGGCAAGGAAGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGACTCAAGAGGAAGATGATATTCTCAGAAAGCAGATTAGCATCCATGGAACTGAGAATTGGGCAATTATTGCGTCTAAATTCAAGGATAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCGGAGGAAGACATGCTCTTATGTGAGGCTCAAAAAATATTTGGTAACAGATGGACAGAAATAGCAAAGGTGGTTTCGGGCAGAACGGATAATGCAGTGAAAAACCGTTTCTCCACACTGTGCAAGAAGAGAGCGAAATTTGAAGCCTTGGCAAAAGAGAATAACACCAATTCAAATAACAAAAGGATTATTATCCAACGTGGTGATAACACAGACTCAACATCTGAGGCTGCAGCACCTACTAAGAAGATGAGGAGAGCCCATATCCCTGATGCTGCAGAAAAGATCAACTATGGAGACAGATCACATAAGAAATGTGGGACACCAGTAAACCAGCAGTCAAGATCGCCATTTTCAGTGTTAGCTCAAAACATGCCAGACCAGCTGGAAGCCTCCAATGCCAAGTTCAGCAACATTGACCAGAATTGCAAGACTCAAGGAACATTTCTTAAAGAGGATGATCCAATGATAAGCGTGCTGATGCAACAAGCAGAGTTACTAAGTTCACTAGCTCTAAAAGTTAATACAGATGACGTGGACCAGAGTCTTGAAGACGCATGGAAGGTGCTTCAAGAGTTTATGAACCGAACCAAAGAATCAGATATTCTCAAATATAAGATTCCAGATTTACAGCTCATAGATCTTAAAGTTATGATGGAGGACTTAAAGAGTAGTAACGAGGGAAGCCAGTCGTGTTGGAGGCAACCAGAACTGCATGAACACTCTCCAAGCAGTTCTGAATACAGTACAGGATCAACTCTCCTGCCCCATTCAGTAGGTGAGAATTTGGAACATTCACTGCTTCAGGATATTGGAAACGAACTAAACTCTATCCAATTTGGAGATCAAAAAGAAGTCAGCGAATGTGGGAAAGAGGTTCTTTCTGCTGCAACTGTGGGTCAAGATATCTTCACATCTTGTGAGGAACAGATAAGCAACGATGGCATTGTTTCTGCCTCATCAAGCACAGAGTTCAGTTCCCCTCTCCAAGTTACCCCTATTTTCAGATCCTTGGCTGCAGGAATTCCCAGCCCACAATTTTCAGAAAGTGAAAGGAGCTTCCTTATGAAAACACTAGGAATAGAGTCCCCATCCATGAACCCAAGTGCCAACCCCTCACAACCCCCGCCCTGCAAACGAGCCCTACTACAAAGTCTATAA 1395 0.4308 MKKQQQQQLGKEEESKKKERHIVTWTQEEDDILRKQISIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENNTNSNNKRIIIQRGDNTDSTSEAAAPTKKMRRAHIPDAAEKINYGDRSHKKCGTPVNQQSRSPFSVLAQNMPDQLEASNAKFSNIDQNCKTQGTFLKEDDPMISVLMQQAELLSSLALKVNTDDVDQSLEDAWKVLQEFMNRTKESDILKYKIPDLQLIDLKVMMEDLKSSNEGSQSCWRQPELHEHSPSSSEYSTGSTLLPHSVGENLEHSLLQDIGNELNSIQFGDQKEVSECGKEVLSAATVGQDIFTSCEEQISNDGIVSASSSTEFSSPLQVTPIFRSLAAGIPSPQFSESERSFLMKTLGIESPSMNPSANPSQPPPCKRALLQSL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1736 464 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Bisa01g1736 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 123 IPR017930 -
Bisa01g1736 464 MobiDBLite consensus disorder prediction 1 20 - -
Bisa01g1736 464 SMART sant 73 121 IPR001005 -
Bisa01g1736 464 SMART sant 21 70 IPR001005 -
Bisa01g1736 464 CDD SANT 77 118 IPR001005 -
Bisa01g1736 464 FunFam Transcription factor MYB124 17 73 - -
Bisa01g1736 464 MobiDBLite consensus disorder prediction 304 330 - -
Bisa01g1736 464 ProSiteProfiles Myb-like domain profile. 25 68 IPR001005 -
Bisa01g1736 464 SUPERFAMILY Homeodomain-like 21 115 IPR009057 -
Bisa01g1736 464 MobiDBLite consensus disorder prediction 439 464 - -
Bisa01g1736 464 CDD SANT 24 68 IPR001005 -
Bisa01g1736 464 Gene3D - 12 73 - -
Bisa01g1736 464 PANTHER MYB PROTEIN-RELATED 24 161 - -
Bisa01g1736 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 72 IPR017930 -
Bisa01g1736 464 Gene3D - 76 147 - -
Bisa01g1736 464 Pfam Myb-like DNA-binding domain 25 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1736 Bisa-ChrBisa01 29906182 29910630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1736 63 464 MYB Transcription Factor Family AT1G14350 55.283 7.76e-143 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g1736 Myb_DNA-bind_6 1.6e-15 CL0123