Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1733 ATGTTCAACCAGAGGTTCAAACCATGTTTTCATTTCTGGGATGTTTTCTTTCTGTCATTCAAGCCATTTCCGGTCTCAGGAAAGGGTCAGAGACACAGAGATGAAAGGCAGAGATACACAGCTAATCCAAGGGATTTGAATGTTCTGAAAGTGGATAAGGGTAAAGGGTTCCAAACACATAAGCCCACGAGCTTTTGCTATAAAGTGTTGGAAGATGCAACCCGCAGGTTCAGCAACAAGAACTTAATCGGGCAGGGAGGTTTCGGTGATGTTTATAAGGGATATCTCTCGCACTACACCATGAATGCTGCAAAACACGACGAAGGATTTCCTATAGCTGTTAAGAGAATAAGGAGGCCAGGAGCACGAGGCCATGAAGAATGGCTGAATGAAGTGGAATATCTGAGCAAACTAAGCCATCCAAACGTGGTGAGGCTCATTGGGTATTGCCGAGAGGGCCAGCATAAAATGCTGGTTTATGAGTACATGAGTGGAGGAAGCTTGGAGGATCATCTCTTGAAAGAGGACAGAGGAAAGCTACACTGGAACAGAAGAATTAATTTAGCACTTGGAGCAGCAAGGGGTTTAGATTATCTTCACACCTATGGAACACCAGTCATTCATCGTGATATCAAATCTCCCAATATCCTGCTGGATAATAACTTCAATGCAAAGCTCTCAGACTTCGGACTGGCCAGAGATGGACCTGAAGGTGACCAGTCCCACGTATCAACCAGAATCCTTGGCACCAGAGGCTATTTTGCCCCAGAGTATATGGCCACAGGGCATTTAACACTAAAAGCTGATGTATACAGCTTCGGAGTGGTTCTGCTAGAGATACTGTCAGGCTCTGAGGCAGTGAGGAAACATTCAAATGGGGGGATGGGAACTCTTGCCCAGTGGGCTGAGCCATTTCTGAGCAATGCATTGGAGCTGCACCGTGTCACAGACAGGAGTCTTAGAAATTACTTTCCAATGGAAGCAGCTTTTGAGTTGGCTCAACTAATACTTAGCTGCCTCTGCTTAAACCCCAAGCAGCGCCCAACAATGGCTGAAGTGGTGGCTGCCTTAGAACATATTGAGCTAAACATGGGATTGCATTATAAGAGATCATACAGTAGAACTAGAACCTATACTTTTGCTCACTCTTAA 1152 0.4531 MFNQRFKPCFHFWDVFFLSFKPFPVSGKGQRHRDERQRYTANPRDLNVLKVDKGKGFQTHKPTSFCYKVLEDATRRFSNKNLIGQGGFGDVYKGYLSHYTMNAAKHDEGFPIAVKRIRRPGARGHEEWLNEVEYLSKLSHPNVVRLIGYCREGQHKMLVYEYMSGGSLEDHLLKEDRGKLHWNRRINLALGAARGLDYLHTYGTPVIHRDIKSPNILLDNNFNAKLSDFGLARDGPEGDQSHVSTRILGTRGYFAPEYMATGHLTLKADVYSFGVVLLEILSGSEAVRKHSNGGMGTLAQWAEPFLSNALELHRVTDRSLRNYFPMEAAFELAQLILSCLCLNPKQRPTMAEVVAALEHIELNMGLHYKRSYSRTRTYTFAHS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1733 383 ProSitePatterns Protein kinases ATP-binding region signature. 83 115 IPR017441 GO:0005524
Bisa01g1733 383 Gene3D Phosphorylase Kinase; domain 1 48 162 - -
Bisa01g1733 383 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 50 162 - -
Bisa01g1733 383 Gene3D Transferase(Phosphotransferase) domain 1 163 375 - -
Bisa01g1733 383 CDD STKc_IRAK 83 360 - -
Bisa01g1733 383 FunFam PTI1-like tyrosine-protein kinase 3 163 370 - -
Bisa01g1733 383 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1733 383 SMART serkin_6 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1733 383 Pfam Protein tyrosine and serine/threonine kinase 80 357 IPR001245 GO:0004672|GO:0006468
Bisa01g1733 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Bisa01g1733 383 PANTHER OS01G0588500 PROTEIN-RELATED 60 361 - -
Bisa01g1733 383 SUPERFAMILY Protein kinase-like (PK-like) 59 361 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1733 Bisa-ChrBisa01 29870551 29873093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1733 33 357 Glycoside Hydrolase AT3G07070 44.411 7.57e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa01g1733 PK_Tyr_Ser-Thr 2e-54 CL0016