Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1727 ATGCGATGGCGCGTGACCTTGGGTGATTACAAATCTGGATTTTTGGTTATGGTAGTGTTCCACCACTCTCACAGTATGAAGAATCTCTGGGTTTCTTTCTGTTACTTGCTTCCTGCAATTTTTCTTGTTCTGCTTACTCCCGTTTCAGATGCACAGTTAGCCCCAAGCGAAAGAAGAATTCTTTTCCAAGTTCAGAAATTTCTTGAATATCCTGAGGCTCTTCAAGGTTGGACCAACTGGACTAACTTCTGCTACCTCCCGCCCTCCCCTTCTCTCAAGCTTGTCTGTTCTGATAATCATGTAAGAGAATTGACTATAGTTGGAAACAAGAGCTCTTCTTCGCTTCAGACACTTTCTGAAAGATTTTCCATTGATTCCTTCTTCACTTTGTTGACCAAGCTTTCGAATTTAAAGGTTCTTTCACTTGTGTCCTTGGGTTTGTGGGGTCCTTTACCTGCCAAGATCAACAGGTTCCGGTCGCTTCAAGTTCTCAACTTTAGCTCAAATTCCATACATGGGGATATCCCATCATCGATCTCTTCCATGAAAACTCTCAGGAGTCTGGTTTTGGCTGGTAATTTGCTCAACGGGAGTGTCCCAGATCTCAAGAGACTAGCTTCTCTTGAAGAGCTCAATCTGGGTGACAACAAACTGGGTCCAGAGTTCCCTTCATTGGGCAACAATCTTATGAGCATAGTGTTGAGAAACAATTCTCTGAGGTCTAAAATTCCTTCACAGTTCAATCACTTTGATAAGCTTCAAAAACTCGACATCTCTTCCAATGAAGTTTTTGGAGACATACCAGCTTTTCTTTTCTCTCTGCCTTCAATTCAGTTTGTGAACTTGGCAGAAAACCAACTCAGTGGTGCCATCTCAATGAACGTAGCCTGTGGTTCTTCTCTGACATTTGTGGATATCTCACACAACCTTTTGGTGGGAAAACTGCCATCCTGCATTGGGTCAAAAGCAAAGTCCTCAAATCGTACGGTTTTGTATTCTGGGAATTGTTTGTCCACGAGAGGCTTAAAAGACCAACAGCCTCCTTCATATTGCAAGAAAGAAGAGGCCTTATATGTTAAGCCTCCAAATAGAAGCCAGAAGGAGGAGTCAGGTATGAAACTAGGATTAATACTCGGTATAATTGGAGGTTTTCTAGGACTAGGAATTTCAGTGCTTCTGGCTCTGTTTATTCTGTTCATCATGAGAAAATCCAAAGCAGAAAGAGCCGATGATCATTTAGACAGATCTATGGCTGATAAATTCCCTGTCCGTGCATCTCCAGGACCAAATATTGATGCAAGGCGTATTCCTCAGACAATGAGAATAGCTGCAATTGGACTTCAACCATACCATATCTTCTCATTGGAGGAAATTGAAGATGCAACAAACAACTTTGACCAATCAAATCTGTTAGGAGAAGAATATGGGGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCGATGGTCCTGGTTAACTGTGTGAAACTGAAGCAGAAAAATTTAACCCAAAGCCTCATTCAGCTGCACATGGAGGTGCTAACCAATTTGAGGCATAGGAATTTGGTAAGTGTTATAGGACACTGCGTCATAAATTCTCAGGACAATCCTCAGACAACGAGTTCAGTCTGTGTTGTCTTTGAACCCATCTCAAATGGGTCATTGAGGGATCATCTTACAGACAGCAGAAAGAAGGCTATACTGAAATGGCCACAAAGAATGGCGATCACAATAGGAATTGCTAGAGGGATCCAGTTCTTACACACAGGGGTTGTTCCTGGCTTATTTGGCAATAATATAAAAATTGAGAACATTCTTTTGGATGATAGTCTCAACGCTAAAGTTAGCAAATATAATATACCATTGTTATCCAGTCAGATTGGCAGCACTGATGAAAGCGGAGAACAGGAAGACATCTATCAGTTGGGTGTTATTCTACTTGAACTTATCACTGGCAAACATGTTTCATCTGCCAGTGAAGTAGAGGTGCTCAAGGAAGAGCTAGAGGGAGGTTTATCAGAAGCAGCATCAGTTCTAAGGGGAGCAACTGACCCCACCATCAGGGGAACTTATGCATACGAATCATTGAGGATCACAGTTCAGATTACCATCAATTGCCTCGCCAAAGCTCCTAGCATGCGCCCTTCAATAGAAGATATTCTCTGGAATTTGCAGTACTCGATTCAAGTCCAAGAGGCATGGACCAGCAGTGGAAATCTCAGTACAAAATTGTAG 2235 0.4224 MRWRVTLGDYKSGFLVMVVFHHSHSMKNLWVSFCYLLPAIFLVLLTPVSDAQLAPSERRILFQVQKFLEYPEALQGWTNWTNFCYLPPSPSLKLVCSDNHVRELTIVGNKSSSSLQTLSERFSIDSFFTLLTKLSNLKVLSLVSLGLWGPLPAKINRFRSLQVLNFSSNSIHGDIPSSISSMKTLRSLVLAGNLLNGSVPDLKRLASLEELNLGDNKLGPEFPSLGNNLMSIVLRNNSLRSKIPSQFNHFDKLQKLDISSNEVFGDIPAFLFSLPSIQFVNLAENQLSGAISMNVACGSSLTFVDISHNLLVGKLPSCIGSKAKSSNRTVLYSGNCLSTRGLKDQQPPSYCKKEEALYVKPPNRSQKEESGMKLGLILGIIGGFLGLGISVLLALFILFIMRKSKAERADDHLDRSMADKFPVRASPGPNIDARRIPQTMRIAAIGLQPYHIFSLEEIEDATNNFDQSNLLGEEYGGQLYKGWLRDGSMVLVNCVKLKQKNLTQSLIQLHMEVLTNLRHRNLVSVIGHCVINSQDNPQTTSSVCVVFEPISNGSLRDHLTDSRKKAILKWPQRMAITIGIARGIQFLHTGVVPGLFGNNIKIENILLDDSLNAKVSKYNIPLLSSQIGSTDESGEQEDIYQLGVILLELITGKHVSSASEVEVLKEELEGGLSEAASVLRGATDPTIRGTYAYESLRITVQITINCLAKAPSMRPSIEDILWNLQYSIQVQEAWTSSGNLSTKL 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1727 744 SUPERFAMILY L domain-like 61 338 - -
Bisa01g1727 744 Pfam Protein tyrosine and serine/threonine kinase 469 618 IPR001245 GO:0004672|GO:0006468
Bisa01g1727 744 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 54 227 - -
Bisa01g1727 744 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 229 356 - -
Bisa01g1727 744 Gene3D Ribonuclease Inhibitor 54 356 IPR032675 -
Bisa01g1727 744 Gene3D Phosphorylase Kinase; domain 1 432 536 - -
Bisa01g1727 744 ProSiteProfiles Protein kinase domain profile. 465 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1727 744 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 550 740 - -
Bisa01g1727 744 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 228 725 - -
Bisa01g1727 744 SUPERFAMILY Protein kinase-like (PK-like) 445 724 IPR011009 -
Bisa01g1727 744 Gene3D Transferase(Phosphotransferase) domain 1 623 736 - -
Bisa01g1727 744 Gene3D Transferase(Phosphotransferase) domain 1 550 622 - -
Bisa01g1727 744 Pfam Leucine rich repeat 228 287 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1727 Bisa-ChrBisa01 29735521 29740349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1727 49 659 Miscellaneous Gene Families AT2G02780 50.078 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Bisa01g1727 PK_Tyr_Ser-Thr 1.4e-12 CL0016