Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1725 ATGGTCTCCTCTCTGTATACAGAAGAGAACCTAAGCCGGGAAACGCCAGGGGGGGAAGAGAAGGTTAAAGGATTGGACTTTGGAGTTTGGAGGCAAGAATCCAAGATGTTGAAGCTATACTATCCTTCCTCTTCTTCCTCAGTCACTACTACACAATACGCCTTTAAGCTCTGCCCTAACCACAGTTTCTCCCCAAAGCCCTTTTCTTTTTGTCGCGCTTACAAGCTCAGTGGCCTAAGCTTCTTCCCTGCCCTACAATCCTCCCGCAGAAACATACACTCTATCAAATGTCGCCAGTCAGAGTACTTTGACCAGCCAAGCTTGGTTAAACCCACTAGAATTGCAAACGGAAGTCGTGCAGTTGAAGCTCTGCCACCTAGGGTTTATGTGGGTCACTCGATTTACAAAGGGAAGGCCGCGCTTACGGTGACTCCTAGGCCTCCAGAATTTGCGACATTGGATTCAGGGGCATTCAAAGTATCTCGGGAAGGATATGTGTTGCTTCAGTTTGCTCCTGCAGTTGGTATGCGCCAATATGACTGGAACAGAAAGCAGGTATTCTCTCTATCAGTGGGTGAAATGGGAAACCTAATCAGCCTTGGTGCAAGGGAGTCTTGTGAATTTTTCCATGATCCTTTTAAGGGAAAAAGTGACGAAGGTAAAGTCAGAAAAGTTTTGAAGGTGGAGCCACTTCCAGATGGCTCTGGTCACTTTTTTAACCTCAGTGTTCAAAACAAGATTGAGAACTTGGATGAAAACATCTATATCCCTGTTACAAAAGCAGAGTTATCAGTGTTCACCACAATTTTTAATTTTATCATGCCATACCTTCTAGGTTGGCATGCATTTGCAAATTCCATAAAGCCAGAGGATCAAAGCCGAGGGAATGACGCAAGCCCACGATATGGAGGAGATTATGAGTGGAGCAGATAA 933 0.4523 MVSSLYTEENLSRETPGGEEKVKGLDFGVWRQESKMLKLYYPSSSSSVTTTQYAFKLCPNHSFSPKPFSFCRAYKLSGLSFFPALQSSRRNIHSIKCRQSEYFDQPSLVKPTRIANGSRAVEALPPRVYVGHSIYKGKAALTVTPRPPEFATLDSGAFKVSREGYVLLQFAPAVGMRQYDWNRKQVFSLSVGEMGNLISLGARESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKIENLDENIYIPVTKAELSVFTTIFNFIMPYLLGWHAFANSIKPEDQSRGNDASPRYGGDYEWSR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1725 310 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 119 294 - -
Bisa01g1725 310 MobiDBLite consensus disorder prediction 289 310 - -
Bisa01g1725 310 SUPERFAMILY ssDNA-binding transcriptional regulator domain 126 310 IPR009044 GO:0003677|GO:0006355
Bisa01g1725 310 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 102 310 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bisa01g1725 310 Gene3D Transcriptional Coactivator Pc4; Chain A 120 298 IPR009044 GO:0003677|GO:0006355
Bisa01g1725 310 Pfam Whirly transcription factor 134 268 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1725 Bisa-ChrBisa01 29716736 29720667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1725 73 310 Whirly Transcription Factor Family AT1G14410 65.560 1.19e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Bisa01g1725 Whirly 1.6e-61 CL0609